Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes

Leukemia epitomizes the class of highly complex diseases that new technologies aim to tackle by using large sets of single-cell-level information. Achieving such a goal depends critically not only on experimental techniques but also on approaches to interpret the data. A most pressing issue is to id...

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Main Author: Jose M. G. Vilar
Format: Article
Language:English
Published: American Physical Society 2014-05-01
Series:Physical Review X
Online Access:http://doi.org/10.1103/PhysRevX.4.021038
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spelling doaj-7c8c12651dc2416b8ab93e0c513e11302020-11-24T21:53:40ZengAmerican Physical SocietyPhysical Review X2160-33082014-05-014202103810.1103/PhysRevX.4.021038Entropy of Leukemia on Multidimensional Morphological and Molecular LandscapesJose M. G. VilarLeukemia epitomizes the class of highly complex diseases that new technologies aim to tackle by using large sets of single-cell-level information. Achieving such a goal depends critically not only on experimental techniques but also on approaches to interpret the data. A most pressing issue is to identify the salient quantitative features of the disease from the resulting massive amounts of information. Here, I show that the entropies of cell-population distributions on specific multidimensional molecular and morphological landscapes provide a set of measures for the precise characterization of normal and pathological states, such as those corresponding to healthy individuals and acute myeloid leukemia (AML) patients. I provide a systematic procedure to identify the specific landscapes and illustrate how, applied to cell samples from peripheral blood and bone marrow aspirates, this characterization accurately diagnoses AML from just flow cytometry data. The methodology can generally be applied to other types of cell populations and establishes a straightforward link between the traditional statistical thermodynamics methodology and biomedical applications.http://doi.org/10.1103/PhysRevX.4.021038
collection DOAJ
language English
format Article
sources DOAJ
author Jose M. G. Vilar
spellingShingle Jose M. G. Vilar
Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes
Physical Review X
author_facet Jose M. G. Vilar
author_sort Jose M. G. Vilar
title Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes
title_short Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes
title_full Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes
title_fullStr Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes
title_full_unstemmed Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes
title_sort entropy of leukemia on multidimensional morphological and molecular landscapes
publisher American Physical Society
series Physical Review X
issn 2160-3308
publishDate 2014-05-01
description Leukemia epitomizes the class of highly complex diseases that new technologies aim to tackle by using large sets of single-cell-level information. Achieving such a goal depends critically not only on experimental techniques but also on approaches to interpret the data. A most pressing issue is to identify the salient quantitative features of the disease from the resulting massive amounts of information. Here, I show that the entropies of cell-population distributions on specific multidimensional molecular and morphological landscapes provide a set of measures for the precise characterization of normal and pathological states, such as those corresponding to healthy individuals and acute myeloid leukemia (AML) patients. I provide a systematic procedure to identify the specific landscapes and illustrate how, applied to cell samples from peripheral blood and bone marrow aspirates, this characterization accurately diagnoses AML from just flow cytometry data. The methodology can generally be applied to other types of cell populations and establishes a straightforward link between the traditional statistical thermodynamics methodology and biomedical applications.
url http://doi.org/10.1103/PhysRevX.4.021038
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