Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic Anthropology
Age-at-death estimation constitutes one of the key parameters for identification of human remains in forensic investigations. However, for applications in forensic anthropology, many current methods are not sufficiently accurate for adult individuals, leading to chronological age estimates erring by...
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doaj-7a95fabe0fd647a7bcee26baf7933f962021-04-02T23:03:33ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-04-01223717371710.3390/ijms22073717Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic AnthropologySara C. Zapico0Quentin Gauthier1Aleksandra Antevska2Bruce R. McCord3Department of Chemistry and Biochemistry and International Forensic Research Institute, Florida International University, Miami, FL 33199, USADepartment of Chemistry and Biochemistry and International Forensic Research Institute, Florida International University, Miami, FL 33199, USADepartment of Chemistry, The University of Tennessee, Knoxville, Knoxville, TN 37996, USADepartment of Chemistry and Biochemistry and International Forensic Research Institute, Florida International University, Miami, FL 33199, USAAge-at-death estimation constitutes one of the key parameters for identification of human remains in forensic investigations. However, for applications in forensic anthropology, many current methods are not sufficiently accurate for adult individuals, leading to chronological age estimates erring by ±10 years. Based on recent trends in aging studies, DNA methylation has great potential as a solution to this problem. However, there are only a few studies that have been published utilizing DNA methylation to determine age from human remains. The aim of the present study was to expand the range of this work by analyzing DNA methylation in dental pulp from adult individuals. Healthy erupted third molars were extracted from individuals aged 22–70. DNA from pulp was isolated and bisulfite converted. Pyrosequencing was the chosen technique to assess DNA methylation. As noted in previous studies, we found that ELOVL2 and FHL2 CpGs played a role in age estimation. In addition, three new markers were evaluated—NPTX2, KLF14, and SCGN. A set of CpGs from these five loci was used in four different multivariate regression models, providing a Mean Absolute Error (MAE) between predicted and chronological age of 1.5–2.13 years. The findings from this research can improve age estimation, increasing the accuracy of identification in forensic anthropology.https://www.mdpi.com/1422-0067/22/7/3717age-at-death estimationadultsteethpulpDNA methylationELOVL2 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Sara C. Zapico Quentin Gauthier Aleksandra Antevska Bruce R. McCord |
spellingShingle |
Sara C. Zapico Quentin Gauthier Aleksandra Antevska Bruce R. McCord Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic Anthropology International Journal of Molecular Sciences age-at-death estimation adults teeth pulp DNA methylation ELOVL2 |
author_facet |
Sara C. Zapico Quentin Gauthier Aleksandra Antevska Bruce R. McCord |
author_sort |
Sara C. Zapico |
title |
Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic Anthropology |
title_short |
Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic Anthropology |
title_full |
Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic Anthropology |
title_fullStr |
Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic Anthropology |
title_full_unstemmed |
Identifying Methylation Patterns in Dental Pulp Aging: Application to Age-at-Death Estimation in Forensic Anthropology |
title_sort |
identifying methylation patterns in dental pulp aging: application to age-at-death estimation in forensic anthropology |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1661-6596 1422-0067 |
publishDate |
2021-04-01 |
description |
Age-at-death estimation constitutes one of the key parameters for identification of human remains in forensic investigations. However, for applications in forensic anthropology, many current methods are not sufficiently accurate for adult individuals, leading to chronological age estimates erring by ±10 years. Based on recent trends in aging studies, DNA methylation has great potential as a solution to this problem. However, there are only a few studies that have been published utilizing DNA methylation to determine age from human remains. The aim of the present study was to expand the range of this work by analyzing DNA methylation in dental pulp from adult individuals. Healthy erupted third molars were extracted from individuals aged 22–70. DNA from pulp was isolated and bisulfite converted. Pyrosequencing was the chosen technique to assess DNA methylation. As noted in previous studies, we found that ELOVL2 and FHL2 CpGs played a role in age estimation. In addition, three new markers were evaluated—NPTX2, KLF14, and SCGN. A set of CpGs from these five loci was used in four different multivariate regression models, providing a Mean Absolute Error (MAE) between predicted and chronological age of 1.5–2.13 years. The findings from this research can improve age estimation, increasing the accuracy of identification in forensic anthropology. |
topic |
age-at-death estimation adults teeth pulp DNA methylation ELOVL2 |
url |
https://www.mdpi.com/1422-0067/22/7/3717 |
work_keys_str_mv |
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