Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa
The Caryophyllaceae family is complex. Several attempts have been carried out in the past to study Caryophyllaceae members. This study mainly focused on Allochrusa Bunge to determine its genetic structure and used ISSR markers, ITS, and rps16 data to classify and differentiate Allochrusa species. We...
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doaj-7a86157bc3ba460ba03ec90322f20d902021-10-09T19:53:42ZengFirenze University PressCaryologia 0008-71142165-53912021-10-0174210.36253/caryologia-958Morphological method and molecular marker determine genetic diversity and population structure in AllochrusaKun Zhu0Lijie Liu1Shanshan Li2Bo Li3Majid Khayatnezhad4Abdul Shakoor5Key Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceKey Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceKey Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceKey Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceDepartment of Environmental Sciences and Engineering, Ardabil Branch, Islamic Azad University, ArdabilCollege of Environment and Planning, Henan University, Kaifeng, 475004, HenanThe Caryophyllaceae family is complex. Several attempts have been carried out in the past to study Caryophyllaceae members. This study mainly focused on Allochrusa Bunge to determine its genetic structure and used ISSR markers, ITS, and rps16 data to classify and differentiate Allochrusa species. We collected 122 Allochrusa specimens. Our analysis included morphological and molecular method approaches. Morphometry analysis indicated that floral characters could assist in the identification of Allochrusa species. A. persica (Boiss.) Boiss. and A. versicolor Fisch. & C.A.Mey. showed affinity to each other. A. bungei Boiss. formed a separate group. Analysis of molecular variance showed significant genetic differentiation in Allochrusa (p= 0.001). The majority of genetic variation was among the Allochrusa population. We recorded minimum gene flow (Nm=0.176) between Allochrusa species. Besides this, isolation by distance occurs in Allochrusa members, as shown in the Mantel test result (r = 0.01, p = 0.0002). STRUCTURE analysis revealed three genetic groups. It is evident that A. persica, A. versicolor, and A. bungei differ genetically from each other. Our current findings have implications in plant systematics and biodiversity management. https://riviste.fupress.net/index.php/caryologia/article/view/958AllochrusaISSR–Analysisnetworkpopulation structurespecies delimitation |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Kun Zhu Lijie Liu Shanshan Li Bo Li Majid Khayatnezhad Abdul Shakoor |
spellingShingle |
Kun Zhu Lijie Liu Shanshan Li Bo Li Majid Khayatnezhad Abdul Shakoor Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa Caryologia Allochrusa ISSR–Analysis network population structure species delimitation |
author_facet |
Kun Zhu Lijie Liu Shanshan Li Bo Li Majid Khayatnezhad Abdul Shakoor |
author_sort |
Kun Zhu |
title |
Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa |
title_short |
Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa |
title_full |
Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa |
title_fullStr |
Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa |
title_full_unstemmed |
Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa |
title_sort |
morphological method and molecular marker determine genetic diversity and population structure in allochrusa |
publisher |
Firenze University Press |
series |
Caryologia |
issn |
0008-7114 2165-5391 |
publishDate |
2021-10-01 |
description |
The Caryophyllaceae family is complex. Several attempts have been carried out in the past to study Caryophyllaceae members. This study mainly focused on Allochrusa Bunge to determine its genetic structure and used ISSR markers, ITS, and rps16 data to classify and differentiate Allochrusa species. We collected 122 Allochrusa specimens. Our analysis included morphological and molecular method approaches. Morphometry analysis indicated that floral characters could assist in the identification of Allochrusa species. A. persica (Boiss.) Boiss. and A. versicolor Fisch. & C.A.Mey. showed affinity to each other. A. bungei Boiss. formed a separate group. Analysis of molecular variance showed significant genetic differentiation in Allochrusa (p= 0.001). The majority of genetic variation was among the Allochrusa population. We recorded minimum gene flow (Nm=0.176) between Allochrusa species. Besides this, isolation by distance occurs in Allochrusa members, as shown in the Mantel test result (r = 0.01, p = 0.0002). STRUCTURE analysis revealed three genetic groups. It is evident that A. persica, A. versicolor, and A. bungei differ genetically from each other. Our current findings have implications in plant systematics and biodiversity management.
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topic |
Allochrusa ISSR–Analysis network population structure species delimitation |
url |
https://riviste.fupress.net/index.php/caryologia/article/view/958 |
work_keys_str_mv |
AT kunzhu morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa AT lijieliu morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa AT shanshanli morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa AT boli morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa AT majidkhayatnezhad morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa AT abdulshakoor morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa |
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