Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa

The Caryophyllaceae family is complex. Several attempts have been carried out in the past to study Caryophyllaceae members. This study mainly focused on Allochrusa Bunge to determine its genetic structure and used ISSR markers, ITS, and rps16 data to classify and differentiate Allochrusa species. We...

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Main Authors: Kun Zhu, Lijie Liu, Shanshan Li, Bo Li, Majid Khayatnezhad, Abdul Shakoor
Format: Article
Language:English
Published: Firenze University Press 2021-10-01
Series:Caryologia
Subjects:
Online Access:https://riviste.fupress.net/index.php/caryologia/article/view/958
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spelling doaj-7a86157bc3ba460ba03ec90322f20d902021-10-09T19:53:42ZengFirenze University PressCaryologia 0008-71142165-53912021-10-0174210.36253/caryologia-958Morphological method and molecular marker determine genetic diversity and population structure in AllochrusaKun Zhu0Lijie Liu1Shanshan Li2Bo Li3Majid Khayatnezhad4Abdul Shakoor5Key Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceKey Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceKey Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceKey Laboratory of Resistance Gene Engineering and Preservation of Biodiversity in Cold Areas, College of Life Science, Agriculture and Forestry, Qiqihar University, Qiqihar Heilongjiang ProvinceDepartment of Environmental Sciences and Engineering, Ardabil Branch, Islamic Azad University, ArdabilCollege of Environment and Planning, Henan University, Kaifeng, 475004, HenanThe Caryophyllaceae family is complex. Several attempts have been carried out in the past to study Caryophyllaceae members. This study mainly focused on Allochrusa Bunge to determine its genetic structure and used ISSR markers, ITS, and rps16 data to classify and differentiate Allochrusa species. We collected 122 Allochrusa specimens. Our analysis included morphological and molecular method approaches. Morphometry analysis indicated that floral characters could assist in the identification of Allochrusa species. A. persica (Boiss.) Boiss. and A. versicolor Fisch. & C.A.Mey. showed affinity to each other. A. bungei Boiss. formed a separate group. Analysis of molecular variance showed significant genetic differentiation in Allochrusa (p= 0.001). The majority of genetic variation was among the Allochrusa population. We recorded minimum gene flow (Nm=0.176) between Allochrusa species. Besides this, isolation by distance occurs in Allochrusa members, as shown in the Mantel test result (r = 0.01, p = 0.0002). STRUCTURE analysis revealed three genetic groups. It is evident that A. persica, A. versicolor, and A. bungei differ genetically from each other. Our current findings have implications in plant systematics and biodiversity management. https://riviste.fupress.net/index.php/caryologia/article/view/958AllochrusaISSR–Analysisnetworkpopulation structurespecies delimitation
collection DOAJ
language English
format Article
sources DOAJ
author Kun Zhu
Lijie Liu
Shanshan Li
Bo Li
Majid Khayatnezhad
Abdul Shakoor
spellingShingle Kun Zhu
Lijie Liu
Shanshan Li
Bo Li
Majid Khayatnezhad
Abdul Shakoor
Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa
Caryologia
Allochrusa
ISSR–Analysis
network
population structure
species delimitation
author_facet Kun Zhu
Lijie Liu
Shanshan Li
Bo Li
Majid Khayatnezhad
Abdul Shakoor
author_sort Kun Zhu
title Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa
title_short Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa
title_full Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa
title_fullStr Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa
title_full_unstemmed Morphological method and molecular marker determine genetic diversity and population structure in Allochrusa
title_sort morphological method and molecular marker determine genetic diversity and population structure in allochrusa
publisher Firenze University Press
series Caryologia
issn 0008-7114
2165-5391
publishDate 2021-10-01
description The Caryophyllaceae family is complex. Several attempts have been carried out in the past to study Caryophyllaceae members. This study mainly focused on Allochrusa Bunge to determine its genetic structure and used ISSR markers, ITS, and rps16 data to classify and differentiate Allochrusa species. We collected 122 Allochrusa specimens. Our analysis included morphological and molecular method approaches. Morphometry analysis indicated that floral characters could assist in the identification of Allochrusa species. A. persica (Boiss.) Boiss. and A. versicolor Fisch. & C.A.Mey. showed affinity to each other. A. bungei Boiss. formed a separate group. Analysis of molecular variance showed significant genetic differentiation in Allochrusa (p= 0.001). The majority of genetic variation was among the Allochrusa population. We recorded minimum gene flow (Nm=0.176) between Allochrusa species. Besides this, isolation by distance occurs in Allochrusa members, as shown in the Mantel test result (r = 0.01, p = 0.0002). STRUCTURE analysis revealed three genetic groups. It is evident that A. persica, A. versicolor, and A. bungei differ genetically from each other. Our current findings have implications in plant systematics and biodiversity management.
topic Allochrusa
ISSR–Analysis
network
population structure
species delimitation
url https://riviste.fupress.net/index.php/caryologia/article/view/958
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AT lijieliu morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa
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AT majidkhayatnezhad morphologicalmethodandmolecularmarkerdeterminegeneticdiversityandpopulationstructureinallochrusa
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