Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography

Objectives: The subtype classification of lung adenocarcinoma is important for treatment decision. This study aimed to investigate the deep learning and radiomics networks for predicting histologic subtype classification and survival of lung adenocarcinoma diagnosed through computed tomography (CT)...

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Main Authors: Chengdi Wang, Jun Shao, Junwei Lv, Yidi Cao, Chaonan Zhu, Jingwei Li, Wei Shen, Lei Shi, Dan Liu, Weimin Li
Format: Article
Language:English
Published: Elsevier 2021-08-01
Series:Translational Oncology
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1936523321001339
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spelling doaj-7a5760d77c8845518f343f34052b212d2021-06-23T04:19:52ZengElsevierTranslational Oncology1936-52332021-08-01148101141Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomographyChengdi Wang0Jun Shao1Junwei Lv2Yidi Cao3Chaonan Zhu4Jingwei Li5Wei Shen6Lei Shi7Dan Liu8Weimin Li9Department of Respiratory and Critical Care Medicine, West China Hospital, West China Medical School, Sichuan University, No. 37 Guo Xue Alley, Chengdu 610041, ChinaDepartment of Respiratory and Critical Care Medicine, West China Hospital, West China Medical School, Sichuan University, No. 37 Guo Xue Alley, Chengdu 610041, ChinaHangzhou YITU Healthcare Technology Co., Ltd. Hangzhou, China; Shanghai Key Laboratory of Artificial Intelligence for Medical Image and Knowledge Graph, Shanghai, ChinaHangzhou YITU Healthcare Technology Co., Ltd. Hangzhou, China; Shanghai Key Laboratory of Artificial Intelligence for Medical Image and Knowledge Graph, Shanghai, ChinaHangzhou YITU Healthcare Technology Co., Ltd. Hangzhou, China; Shanghai Key Laboratory of Artificial Intelligence for Medical Image and Knowledge Graph, Shanghai, ChinaDepartment of Respiratory and Critical Care Medicine, West China Hospital, West China Medical School, Sichuan University, No. 37 Guo Xue Alley, Chengdu 610041, ChinaHangzhou YITU Healthcare Technology Co., Ltd. Hangzhou, China; Shanghai Key Laboratory of Artificial Intelligence for Medical Image and Knowledge Graph, Shanghai, ChinaHangzhou YITU Healthcare Technology Co., Ltd. Hangzhou, China; Shanghai Key Laboratory of Artificial Intelligence for Medical Image and Knowledge Graph, Shanghai, ChinaDepartment of Respiratory and Critical Care Medicine, West China Hospital, West China Medical School, Sichuan University, No. 37 Guo Xue Alley, Chengdu 610041, China; Corresponding authors.Department of Respiratory and Critical Care Medicine, West China Hospital, West China Medical School, Sichuan University, No. 37 Guo Xue Alley, Chengdu 610041, China; Corresponding authors.Objectives: The subtype classification of lung adenocarcinoma is important for treatment decision. This study aimed to investigate the deep learning and radiomics networks for predicting histologic subtype classification and survival of lung adenocarcinoma diagnosed through computed tomography (CT) images. Methods: A dataset of 1222 patients with lung adenocarcinoma were retrospectively enrolled from three medical institutions. The anonymised preoperative CT images and pathological labels of atypical adenomatous hyperplasia, adenocarcinoma in situ, minimally invasive adenocarcinoma, invasive adenocarcinoma (IAC) with five predominant components were obtained. These pathological labels were divided into 2-category classification (IAC; non-IAC), 3-category and 8-category. We modeled the classification task of histological subtypes based on modified ResNet-34 deep learning network, radiomics strategies and deep radiomics combined algorithm. Then we established the prognostic models in lung adenocarcinoma patients with survival outcomes. The accuracy (ACC), area under ROC curves (AUCs) and C-index were primarily performed to evaluate the algorithms. Results: This study included a training set (n = 802) and two validation cohorts (internal, n = 196; external, n = 224). The ACC of deep radiomics algorithm in internal validation achieved 0.8776, 0.8061 in the 2-category, 3-category classification, respectively. Even in 8 classifications, the AUC ranged from 0.739 to 0.940 in internal set. Further, we constructed a prognosis model that C-index was 0.892(95% CI: 0.846–0.937) in internal validation set. Conclusions: The automated deep radiomics based triage system has achieved the great performance in the subtype classification and survival predictability in patients with CT-detected lung adenocarcinoma nodules, providing the clinical guide for treatment strategies.http://www.sciencedirect.com/science/article/pii/S1936523321001339Deep learningComputed tomographyLung adenocarcinomaSubtype
collection DOAJ
language English
format Article
sources DOAJ
author Chengdi Wang
Jun Shao
Junwei Lv
Yidi Cao
Chaonan Zhu
Jingwei Li
Wei Shen
Lei Shi
Dan Liu
Weimin Li
spellingShingle Chengdi Wang
Jun Shao
Junwei Lv
Yidi Cao
Chaonan Zhu
Jingwei Li
Wei Shen
Lei Shi
Dan Liu
Weimin Li
Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
Translational Oncology
Deep learning
Computed tomography
Lung adenocarcinoma
Subtype
author_facet Chengdi Wang
Jun Shao
Junwei Lv
Yidi Cao
Chaonan Zhu
Jingwei Li
Wei Shen
Lei Shi
Dan Liu
Weimin Li
author_sort Chengdi Wang
title Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_short Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_full Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_fullStr Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_full_unstemmed Deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
title_sort deep learning for predicting subtype classification and survival of lung adenocarcinoma on computed tomography
publisher Elsevier
series Translational Oncology
issn 1936-5233
publishDate 2021-08-01
description Objectives: The subtype classification of lung adenocarcinoma is important for treatment decision. This study aimed to investigate the deep learning and radiomics networks for predicting histologic subtype classification and survival of lung adenocarcinoma diagnosed through computed tomography (CT) images. Methods: A dataset of 1222 patients with lung adenocarcinoma were retrospectively enrolled from three medical institutions. The anonymised preoperative CT images and pathological labels of atypical adenomatous hyperplasia, adenocarcinoma in situ, minimally invasive adenocarcinoma, invasive adenocarcinoma (IAC) with five predominant components were obtained. These pathological labels were divided into 2-category classification (IAC; non-IAC), 3-category and 8-category. We modeled the classification task of histological subtypes based on modified ResNet-34 deep learning network, radiomics strategies and deep radiomics combined algorithm. Then we established the prognostic models in lung adenocarcinoma patients with survival outcomes. The accuracy (ACC), area under ROC curves (AUCs) and C-index were primarily performed to evaluate the algorithms. Results: This study included a training set (n = 802) and two validation cohorts (internal, n = 196; external, n = 224). The ACC of deep radiomics algorithm in internal validation achieved 0.8776, 0.8061 in the 2-category, 3-category classification, respectively. Even in 8 classifications, the AUC ranged from 0.739 to 0.940 in internal set. Further, we constructed a prognosis model that C-index was 0.892(95% CI: 0.846–0.937) in internal validation set. Conclusions: The automated deep radiomics based triage system has achieved the great performance in the subtype classification and survival predictability in patients with CT-detected lung adenocarcinoma nodules, providing the clinical guide for treatment strategies.
topic Deep learning
Computed tomography
Lung adenocarcinoma
Subtype
url http://www.sciencedirect.com/science/article/pii/S1936523321001339
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