The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma

TP53 mutation (TP53MUT) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53MUT regulates the correlation between ESCA and prognosis have...

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Main Authors: Hongpan Zhang, Zheng Huang, Yangguang Song, Zhihao Yang, Qi Shi, Kaige Wang, Zhiyu Zhang, Zheng Liu, Xiaobin Cui, Feng Li
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-06-01
Series:Frontiers in Genetics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2021.607238/full
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spelling doaj-79eea92b885642018a29022898d1477b2021-06-21T15:54:45ZengFrontiers Media S.A.Frontiers in Genetics1664-80212021-06-011210.3389/fgene.2021.607238607238The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal CarcinomaHongpan Zhang0Zheng Huang1Yangguang Song2Zhihao Yang3Qi Shi4Kaige Wang5Zhiyu Zhang6Zheng Liu7Xiaobin Cui8Feng Li9Feng Li10Department of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaTP53 mutation (TP53MUT) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53MUT regulates the correlation between ESCA and prognosis have not been sufficiently studied. Here, in the current research, we constructed a TP53MUT-related signature to predict the prognosis of patients with esophageal cancer and successfully verified this model in patients in the TP53 mutant group, esophageal squamous cell carcinoma group, and adenocarcinoma group. The risk scores proved to be better independent prognostic factors than clinical features, and prognostic features were combined with other clinical features to establish a convincing nomogram to predict overall survival from 1 to 3 years. In addition, we further predicted the tumor immune cell infiltration, chemical drugs, and immunotherapy responses between the high-risk group and low risk group. Finally, the gene expression of the seven-gene signature (AP002478.1, BHLHA15, FFAR2, IGFBP1, KCTD8, PHYHD1, and SLC26A9) can provide personalized prognosis prediction and insights into new treatments.https://www.frontiersin.org/articles/10.3389/fgene.2021.607238/fulloesophageal carcinomaTP53signatureimmune cell infiltrationtherapeutic responses
collection DOAJ
language English
format Article
sources DOAJ
author Hongpan Zhang
Zheng Huang
Yangguang Song
Zhihao Yang
Qi Shi
Kaige Wang
Zhiyu Zhang
Zheng Liu
Xiaobin Cui
Feng Li
Feng Li
spellingShingle Hongpan Zhang
Zheng Huang
Yangguang Song
Zhihao Yang
Qi Shi
Kaige Wang
Zhiyu Zhang
Zheng Liu
Xiaobin Cui
Feng Li
Feng Li
The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
Frontiers in Genetics
oesophageal carcinoma
TP53
signature
immune cell infiltration
therapeutic responses
author_facet Hongpan Zhang
Zheng Huang
Yangguang Song
Zhihao Yang
Qi Shi
Kaige Wang
Zhiyu Zhang
Zheng Liu
Xiaobin Cui
Feng Li
Feng Li
author_sort Hongpan Zhang
title The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_short The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_full The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_fullStr The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_full_unstemmed The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
title_sort tp53-related signature predicts immune cell infiltration, therapeutic response, and prognosis in patients with esophageal carcinoma
publisher Frontiers Media S.A.
series Frontiers in Genetics
issn 1664-8021
publishDate 2021-06-01
description TP53 mutation (TP53MUT) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53MUT regulates the correlation between ESCA and prognosis have not been sufficiently studied. Here, in the current research, we constructed a TP53MUT-related signature to predict the prognosis of patients with esophageal cancer and successfully verified this model in patients in the TP53 mutant group, esophageal squamous cell carcinoma group, and adenocarcinoma group. The risk scores proved to be better independent prognostic factors than clinical features, and prognostic features were combined with other clinical features to establish a convincing nomogram to predict overall survival from 1 to 3 years. In addition, we further predicted the tumor immune cell infiltration, chemical drugs, and immunotherapy responses between the high-risk group and low risk group. Finally, the gene expression of the seven-gene signature (AP002478.1, BHLHA15, FFAR2, IGFBP1, KCTD8, PHYHD1, and SLC26A9) can provide personalized prognosis prediction and insights into new treatments.
topic oesophageal carcinoma
TP53
signature
immune cell infiltration
therapeutic responses
url https://www.frontiersin.org/articles/10.3389/fgene.2021.607238/full
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