The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma
TP53 mutation (TP53MUT) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53MUT regulates the correlation between ESCA and prognosis have...
Main Authors: | , , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Frontiers Media S.A.
2021-06-01
|
Series: | Frontiers in Genetics |
Subjects: | |
Online Access: | https://www.frontiersin.org/articles/10.3389/fgene.2021.607238/full |
id |
doaj-79eea92b885642018a29022898d1477b |
---|---|
record_format |
Article |
spelling |
doaj-79eea92b885642018a29022898d1477b2021-06-21T15:54:45ZengFrontiers Media S.A.Frontiers in Genetics1664-80212021-06-011210.3389/fgene.2021.607238607238The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal CarcinomaHongpan Zhang0Zheng Huang1Yangguang Song2Zhihao Yang3Qi Shi4Kaige Wang5Zhiyu Zhang6Zheng Liu7Xiaobin Cui8Feng Li9Feng Li10Department of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, Shihezi University School of Medicine, Shihezi, ChinaDepartment of Pathology and Medical Research Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, ChinaTP53 mutation (TP53MUT) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53MUT regulates the correlation between ESCA and prognosis have not been sufficiently studied. Here, in the current research, we constructed a TP53MUT-related signature to predict the prognosis of patients with esophageal cancer and successfully verified this model in patients in the TP53 mutant group, esophageal squamous cell carcinoma group, and adenocarcinoma group. The risk scores proved to be better independent prognostic factors than clinical features, and prognostic features were combined with other clinical features to establish a convincing nomogram to predict overall survival from 1 to 3 years. In addition, we further predicted the tumor immune cell infiltration, chemical drugs, and immunotherapy responses between the high-risk group and low risk group. Finally, the gene expression of the seven-gene signature (AP002478.1, BHLHA15, FFAR2, IGFBP1, KCTD8, PHYHD1, and SLC26A9) can provide personalized prognosis prediction and insights into new treatments.https://www.frontiersin.org/articles/10.3389/fgene.2021.607238/fulloesophageal carcinomaTP53signatureimmune cell infiltrationtherapeutic responses |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hongpan Zhang Zheng Huang Yangguang Song Zhihao Yang Qi Shi Kaige Wang Zhiyu Zhang Zheng Liu Xiaobin Cui Feng Li Feng Li |
spellingShingle |
Hongpan Zhang Zheng Huang Yangguang Song Zhihao Yang Qi Shi Kaige Wang Zhiyu Zhang Zheng Liu Xiaobin Cui Feng Li Feng Li The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma Frontiers in Genetics oesophageal carcinoma TP53 signature immune cell infiltration therapeutic responses |
author_facet |
Hongpan Zhang Zheng Huang Yangguang Song Zhihao Yang Qi Shi Kaige Wang Zhiyu Zhang Zheng Liu Xiaobin Cui Feng Li Feng Li |
author_sort |
Hongpan Zhang |
title |
The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma |
title_short |
The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma |
title_full |
The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma |
title_fullStr |
The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma |
title_full_unstemmed |
The TP53-Related Signature Predicts Immune Cell Infiltration, Therapeutic Response, and Prognosis in Patients With Esophageal Carcinoma |
title_sort |
tp53-related signature predicts immune cell infiltration, therapeutic response, and prognosis in patients with esophageal carcinoma |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Genetics |
issn |
1664-8021 |
publishDate |
2021-06-01 |
description |
TP53 mutation (TP53MUT) is one of the most common gene mutations and frequently occurs in many cancers, especially esophageal carcinoma (ESCA), and it correlates with clinical prognostic outcomes. Nevertheless, the mechanisms by which TP53MUT regulates the correlation between ESCA and prognosis have not been sufficiently studied. Here, in the current research, we constructed a TP53MUT-related signature to predict the prognosis of patients with esophageal cancer and successfully verified this model in patients in the TP53 mutant group, esophageal squamous cell carcinoma group, and adenocarcinoma group. The risk scores proved to be better independent prognostic factors than clinical features, and prognostic features were combined with other clinical features to establish a convincing nomogram to predict overall survival from 1 to 3 years. In addition, we further predicted the tumor immune cell infiltration, chemical drugs, and immunotherapy responses between the high-risk group and low risk group. Finally, the gene expression of the seven-gene signature (AP002478.1, BHLHA15, FFAR2, IGFBP1, KCTD8, PHYHD1, and SLC26A9) can provide personalized prognosis prediction and insights into new treatments. |
topic |
oesophageal carcinoma TP53 signature immune cell infiltration therapeutic responses |
url |
https://www.frontiersin.org/articles/10.3389/fgene.2021.607238/full |
work_keys_str_mv |
AT hongpanzhang thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhenghuang thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT yangguangsong thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhihaoyang thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT qishi thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT kaigewang thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhiyuzhang thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhengliu thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT xiaobincui thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT fengli thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT fengli thetp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT hongpanzhang tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhenghuang tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT yangguangsong tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhihaoyang tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT qishi tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT kaigewang tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhiyuzhang tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT zhengliu tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT xiaobincui tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT fengli tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma AT fengli tp53relatedsignaturepredictsimmunecellinfiltrationtherapeuticresponseandprognosisinpatientswithesophagealcarcinoma |
_version_ |
1721364138649714688 |