Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging

Abstract Background To investigate potential effects of herbicide phytotoxic on crops, a major challenge is a lack of non-destructive and rapid methods to detect plant growth that could allow characterization of herbicide-resistant plants. In such a case, hyperspectral imaging can quickly obtain the...

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Main Authors: Jian Wang, Chu Zhang, Ying Shi, Meijuan Long, Faisal Islam, Chong Yang, Su Yang, Yong He, Weijun Zhou
Format: Article
Language:English
Published: BMC 2020-03-01
Series:Plant Methods
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13007-020-00576-7
id doaj-794f7fb3d49a4b61bf1f34a507311dac
record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Jian Wang
Chu Zhang
Ying Shi
Meijuan Long
Faisal Islam
Chong Yang
Su Yang
Yong He
Weijun Zhou
spellingShingle Jian Wang
Chu Zhang
Ying Shi
Meijuan Long
Faisal Islam
Chong Yang
Su Yang
Yong He
Weijun Zhou
Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging
Plant Methods
Rice
Quinclorac
Salicylic acid
Antioxidant
Support vector machine
Hyperspectral imaging
author_facet Jian Wang
Chu Zhang
Ying Shi
Meijuan Long
Faisal Islam
Chong Yang
Su Yang
Yong He
Weijun Zhou
author_sort Jian Wang
title Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging
title_short Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging
title_full Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging
title_fullStr Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging
title_full_unstemmed Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging
title_sort evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imaging
publisher BMC
series Plant Methods
issn 1746-4811
publishDate 2020-03-01
description Abstract Background To investigate potential effects of herbicide phytotoxic on crops, a major challenge is a lack of non-destructive and rapid methods to detect plant growth that could allow characterization of herbicide-resistant plants. In such a case, hyperspectral imaging can quickly obtain the spectrum for each pixel in the image and monitor status of plants harmlessly. Method Hyperspectral imaging covering the spectral range of 380–1030 nm was investigated to determine the herbicide toxicity in rice cultivars. Two rice cultivars, Xiushui 134 and Zhejing 88, were respectively treated with quinclorac alone and plus salicylic acid (SA) pre-treatment. After ten days of treatments, we collected hyperspectral images and physiological parameters to analyze the differences. The score images obtained were used to explore the differences among samples under diverse treatments by conducting principal component analysis on hyperspectral images. To get useful information from original data, feature extraction was also conducted by principal component analysis. In order to classify samples under diverse treatments, full-spectra-based support vector classification (SVC) models and extracted-feature-based SVC models were established. The prediction maps of samples under different treatments were constructed by applying the SVC models using extracted features on hyperspectral images, which provided direct visual information of rice growth status under herbicide stress. The physiological analysis with the changes of stress-responsive enzymes confirmed the differences of samples under different treatments. Results The physiological analysis showed that SA alleviated the quinclorac toxicity by stimulating enzymatic activity and reducing the levels of reactive oxygen species. The score images indicated there were spectral differences among the samples under different treatments. Full-spectra-based SVC models and extracted-feature-based SVC models obtained good results for the aboveground parts, with classification accuracy over 80% in training, validation and prediction set. The SVC models for Zhejing 88 presented better results than those for Xiushui 134, revealing the different herbicide tolerance between rice cultivars. Conclusion We develop a reliable and effective model using hyperspectral imaging technique which enables the evaluation and visualization of herbicide toxicity for rice. The reflectance spectra variations of rice could reveal the stress status of herbicide toxicity in rice along with the physiological parameters. The visualization of the herbicide toxicity in rice would help to provide the intuitive vision of herbicide toxicity in rice. A monitoring system for detecting herbicide toxicity and its alleviation by SA will benefit from the remarkable success of SVC models and distribution maps.
topic Rice
Quinclorac
Salicylic acid
Antioxidant
Support vector machine
Hyperspectral imaging
url http://link.springer.com/article/10.1186/s13007-020-00576-7
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spelling doaj-794f7fb3d49a4b61bf1f34a507311dac2020-11-25T02:20:09ZengBMCPlant Methods1746-48112020-03-0116111610.1186/s13007-020-00576-7Evaluation of quinclorac toxicity and alleviation by salicylic acid in rice seedlings using ground-based visible/near-infrared hyperspectral imagingJian Wang0Chu Zhang1Ying Shi2Meijuan Long3Faisal Islam4Chong Yang5Su Yang6Yong He7Weijun Zhou8Institute of Crop Science, Ministry of Agriculture and Rural Affairs Key Laboratory of Spectroscopy Sensing, Zhejiang UniversityCollege of Biosystems Engineering and Food Science, Ministry of Agriculture and Rural Affairs Key Laboratory of Spectroscopy Sensing, Zhejiang UniversityInstitute of Crop Science, Ministry of Agriculture and Rural Affairs Key Laboratory of Spectroscopy Sensing, Zhejiang UniversityInstitute of Crop Science, Ministry of Agriculture and Rural Affairs Key Laboratory of Spectroscopy Sensing, Zhejiang UniversityInstitute of Crop Science, Ministry of Agriculture and Rural Affairs Key Laboratory of Spectroscopy Sensing, Zhejiang UniversityBioengineering Research Laboratory, Guangdong Bioengineering Institute (Guangzhou Sugarcane Industry Research Institute)College of Life Sciences, China Jiliang UniversityCollege of Biosystems Engineering and Food Science, Ministry of Agriculture and Rural Affairs Key Laboratory of Spectroscopy Sensing, Zhejiang UniversityInstitute of Crop Science, Ministry of Agriculture and Rural Affairs Key Laboratory of Spectroscopy Sensing, Zhejiang UniversityAbstract Background To investigate potential effects of herbicide phytotoxic on crops, a major challenge is a lack of non-destructive and rapid methods to detect plant growth that could allow characterization of herbicide-resistant plants. In such a case, hyperspectral imaging can quickly obtain the spectrum for each pixel in the image and monitor status of plants harmlessly. Method Hyperspectral imaging covering the spectral range of 380–1030 nm was investigated to determine the herbicide toxicity in rice cultivars. Two rice cultivars, Xiushui 134 and Zhejing 88, were respectively treated with quinclorac alone and plus salicylic acid (SA) pre-treatment. After ten days of treatments, we collected hyperspectral images and physiological parameters to analyze the differences. The score images obtained were used to explore the differences among samples under diverse treatments by conducting principal component analysis on hyperspectral images. To get useful information from original data, feature extraction was also conducted by principal component analysis. In order to classify samples under diverse treatments, full-spectra-based support vector classification (SVC) models and extracted-feature-based SVC models were established. The prediction maps of samples under different treatments were constructed by applying the SVC models using extracted features on hyperspectral images, which provided direct visual information of rice growth status under herbicide stress. The physiological analysis with the changes of stress-responsive enzymes confirmed the differences of samples under different treatments. Results The physiological analysis showed that SA alleviated the quinclorac toxicity by stimulating enzymatic activity and reducing the levels of reactive oxygen species. The score images indicated there were spectral differences among the samples under different treatments. Full-spectra-based SVC models and extracted-feature-based SVC models obtained good results for the aboveground parts, with classification accuracy over 80% in training, validation and prediction set. The SVC models for Zhejing 88 presented better results than those for Xiushui 134, revealing the different herbicide tolerance between rice cultivars. Conclusion We develop a reliable and effective model using hyperspectral imaging technique which enables the evaluation and visualization of herbicide toxicity for rice. The reflectance spectra variations of rice could reveal the stress status of herbicide toxicity in rice along with the physiological parameters. The visualization of the herbicide toxicity in rice would help to provide the intuitive vision of herbicide toxicity in rice. A monitoring system for detecting herbicide toxicity and its alleviation by SA will benefit from the remarkable success of SVC models and distribution maps.http://link.springer.com/article/10.1186/s13007-020-00576-7RiceQuincloracSalicylic acidAntioxidantSupport vector machineHyperspectral imaging