Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and Soybean

Stress associated proteins (SAPs) containing A20/AN1 zinc finger domains have emerged as novel regulators of stress responses. In this study, 27 SAP genes were identified in soybean. The phylogenetic relationships, exon–intron structure, domain structure, chromosomal localization, putative cis-actin...

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Main Authors: Xiang-Zhan Zhang, Wei-Jun Zheng, Xin-You Cao, Xi-Yan Cui, Shu-Ping Zhao, Tai-Fei Yu, Jun Chen, Yong-Bin Zhou, Ming Chen, Shou-Cheng Chai, Zhao-Shi Xu, You-Zhi Ma
Format: Article
Language:English
Published: Frontiers Media S.A. 2019-11-01
Series:Frontiers in Plant Science
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fpls.2019.01453/full
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language English
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author Xiang-Zhan Zhang
Xiang-Zhan Zhang
Wei-Jun Zheng
Xin-You Cao
Xi-Yan Cui
Shu-Ping Zhao
Tai-Fei Yu
Jun Chen
Yong-Bin Zhou
Ming Chen
Shou-Cheng Chai
Zhao-Shi Xu
You-Zhi Ma
spellingShingle Xiang-Zhan Zhang
Xiang-Zhan Zhang
Wei-Jun Zheng
Xin-You Cao
Xi-Yan Cui
Shu-Ping Zhao
Tai-Fei Yu
Jun Chen
Yong-Bin Zhou
Ming Chen
Shou-Cheng Chai
Zhao-Shi Xu
You-Zhi Ma
Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and Soybean
Frontiers in Plant Science
soybean
stress associated proteins
expression analysis
abiotic stresses
abscisic acid sensitivity
author_facet Xiang-Zhan Zhang
Xiang-Zhan Zhang
Wei-Jun Zheng
Xin-You Cao
Xi-Yan Cui
Shu-Ping Zhao
Tai-Fei Yu
Jun Chen
Yong-Bin Zhou
Ming Chen
Shou-Cheng Chai
Zhao-Shi Xu
You-Zhi Ma
author_sort Xiang-Zhan Zhang
title Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and Soybean
title_short Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and Soybean
title_full Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and Soybean
title_fullStr Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and Soybean
title_full_unstemmed Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and Soybean
title_sort genomic analysis of stress associated proteins in soybean and the role of gmsap16 in abiotic stress responses in arabidopsis and soybean
publisher Frontiers Media S.A.
series Frontiers in Plant Science
issn 1664-462X
publishDate 2019-11-01
description Stress associated proteins (SAPs) containing A20/AN1 zinc finger domains have emerged as novel regulators of stress responses. In this study, 27 SAP genes were identified in soybean. The phylogenetic relationships, exon–intron structure, domain structure, chromosomal localization, putative cis-acting elements, and expression patterns of SAPs in various tissues under abiotic stresses were analyzed. Among the soybean SAP genes, GmSAP16 was significantly induced by water deficit stress, salt, and abscisic acid (ABA) and selected for further analysis. GmSAP16 was located in the nucleus and cytoplasm. The overexpression of GmSAP16 in Arabidopsis improved drought and salt tolerance at different developmental stages and increased ABA sensitivity, as indicated by delayed seed germination and stomatal closure. The GmSAP16 transgenic Arabidopsis plants had a higher proline content and a lower water loss rate and malondialdehyde (MDA) content than wild type (WT) plants in response to stresses. The overexpression of GmSAP16 in soybean hairy roots enhanced drought and salt tolerance of soybean seedlings, with higher proline and chlorophyll contents and a lower MDA content than WT. RNA inference (RNAi) of GmSAP16 increased stress sensitivity. Stress-related genes, including GmDREB1B;1, GmNCED3, GmRD22, GmDREB2, GmNHX1, and GmSOS1, showed significant expression alterations in GmSAP16-overexpressing and RNAi plants under stress treatments. These results indicate that soybean SAP genes play important roles in abiotic stress responses.
topic soybean
stress associated proteins
expression analysis
abiotic stresses
abscisic acid sensitivity
url https://www.frontiersin.org/article/10.3389/fpls.2019.01453/full
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spelling doaj-78acb71b70a54aa58e6367d91eb6efde2020-11-25T01:50:11ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2019-11-011010.3389/fpls.2019.01453488699Genomic Analysis of Stress Associated Proteins in Soybean and the Role of GmSAP16 in Abiotic Stress Responses in Arabidopsis and SoybeanXiang-Zhan Zhang0Xiang-Zhan Zhang1Wei-Jun Zheng2Xin-You Cao3Xi-Yan Cui4Shu-Ping Zhao5Tai-Fei Yu6Jun Chen7Yong-Bin Zhou8Ming Chen9Shou-Cheng Chai10Zhao-Shi Xu11You-Zhi Ma12College of Agronomy, Northwest A&F University/State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, ChinaInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, ChinaCollege of Agronomy, Northwest A&F University/State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, ChinaCrop Research Institute, Shandong Academy of Agricultural Sciences, National Engineering Laboratory for Wheat and Maize, Key Laboratory of Wheat Biology and Genetic Improvement, Jinan, ChinaCollege of Life Sciences, Jilin Agricultural University, Changchun, ChinaCollege of Agronomy, Northwest A&F University/State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, ChinaInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, ChinaInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, ChinaCollege of Agronomy, Northwest A&F University/State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, ChinaInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, ChinaCollege of Agronomy, Northwest A&F University/State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, ChinaInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, ChinaInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, ChinaStress associated proteins (SAPs) containing A20/AN1 zinc finger domains have emerged as novel regulators of stress responses. In this study, 27 SAP genes were identified in soybean. The phylogenetic relationships, exon–intron structure, domain structure, chromosomal localization, putative cis-acting elements, and expression patterns of SAPs in various tissues under abiotic stresses were analyzed. Among the soybean SAP genes, GmSAP16 was significantly induced by water deficit stress, salt, and abscisic acid (ABA) and selected for further analysis. GmSAP16 was located in the nucleus and cytoplasm. The overexpression of GmSAP16 in Arabidopsis improved drought and salt tolerance at different developmental stages and increased ABA sensitivity, as indicated by delayed seed germination and stomatal closure. The GmSAP16 transgenic Arabidopsis plants had a higher proline content and a lower water loss rate and malondialdehyde (MDA) content than wild type (WT) plants in response to stresses. The overexpression of GmSAP16 in soybean hairy roots enhanced drought and salt tolerance of soybean seedlings, with higher proline and chlorophyll contents and a lower MDA content than WT. RNA inference (RNAi) of GmSAP16 increased stress sensitivity. Stress-related genes, including GmDREB1B;1, GmNCED3, GmRD22, GmDREB2, GmNHX1, and GmSOS1, showed significant expression alterations in GmSAP16-overexpressing and RNAi plants under stress treatments. These results indicate that soybean SAP genes play important roles in abiotic stress responses.https://www.frontiersin.org/article/10.3389/fpls.2019.01453/fullsoybeanstress associated proteinsexpression analysisabiotic stressesabscisic acid sensitivity