Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil

Abstract As an approach to the exploration of cold-active enzymes, in this study, we isolated a cold-active protease produced by psychrotrophic bacteria from glacial soils of Thajwas Glacier, Himalayas. The isolated strain BO1, identified as Bacillus pumilus, grew well within a temperature range of...

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Main Authors: Saleem Farooq, Ruqeya Nazir, Shabir Ahmad Ganai, Bashir Ahmad Ganai
Format: Article
Language:English
Published: Nature Publishing Group 2021-06-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-92197-w
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spelling doaj-777b739b748d4c538e9517776a8c0ced2021-06-20T11:31:12ZengNature Publishing GroupScientific Reports2045-23222021-06-0111111410.1038/s41598-021-92197-wIsolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soilSaleem Farooq0Ruqeya Nazir1Shabir Ahmad Ganai2Bashir Ahmad Ganai3Department of Environmental Science, University of KashmirMicrobiology Research Laboratory, Centre of Research for Development (CORD), University of KashmirDivision of Basic Sciences and Humanities, FoA, SKUAST-KashmirMicrobiology Research Laboratory, Centre of Research for Development (CORD), University of KashmirAbstract As an approach to the exploration of cold-active enzymes, in this study, we isolated a cold-active protease produced by psychrotrophic bacteria from glacial soils of Thajwas Glacier, Himalayas. The isolated strain BO1, identified as Bacillus pumilus, grew well within a temperature range of 4–30 °C. After its qualitative and quantitative screening, the cold-active protease (Apr-BO1) was purified. The Apr-BO1 had a molecular mass of 38 kDa and showed maximum (37.02 U/mg) specific activity at 20 °C, with casein as substrate. It was stable and active between the temperature range of 5–35 °C and pH 6.0–12.0, with an optimum temperature of 20 °C at pH 9.0. The Apr-BO1 had low Km value of 1.0 mg/ml and V max 10.0 µmol/ml/min. Moreover, it displayed better tolerance to organic solvents, surfactants, metal ions and reducing agents than most alkaline proteases. The results exhibited that it effectively removed the stains even in a cold wash and could be considered a decent detergent additive. Furthermore, through protein modelling, the structure of this protease was generated from template, subtilisin E of Bacillus subtilis (PDB ID: 3WHI), and different methods checked its quality. For the first time, this study reported the protein sequence for psychrotrophic Apr-BO1 and brought forth its novelty among other cold-active proteases.https://doi.org/10.1038/s41598-021-92197-w
collection DOAJ
language English
format Article
sources DOAJ
author Saleem Farooq
Ruqeya Nazir
Shabir Ahmad Ganai
Bashir Ahmad Ganai
spellingShingle Saleem Farooq
Ruqeya Nazir
Shabir Ahmad Ganai
Bashir Ahmad Ganai
Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
Scientific Reports
author_facet Saleem Farooq
Ruqeya Nazir
Shabir Ahmad Ganai
Bashir Ahmad Ganai
author_sort Saleem Farooq
title Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_short Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_full Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_fullStr Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_full_unstemmed Isolation and characterization of a new cold-active protease from psychrotrophic bacteria of Western Himalayan glacial soil
title_sort isolation and characterization of a new cold-active protease from psychrotrophic bacteria of western himalayan glacial soil
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-06-01
description Abstract As an approach to the exploration of cold-active enzymes, in this study, we isolated a cold-active protease produced by psychrotrophic bacteria from glacial soils of Thajwas Glacier, Himalayas. The isolated strain BO1, identified as Bacillus pumilus, grew well within a temperature range of 4–30 °C. After its qualitative and quantitative screening, the cold-active protease (Apr-BO1) was purified. The Apr-BO1 had a molecular mass of 38 kDa and showed maximum (37.02 U/mg) specific activity at 20 °C, with casein as substrate. It was stable and active between the temperature range of 5–35 °C and pH 6.0–12.0, with an optimum temperature of 20 °C at pH 9.0. The Apr-BO1 had low Km value of 1.0 mg/ml and V max 10.0 µmol/ml/min. Moreover, it displayed better tolerance to organic solvents, surfactants, metal ions and reducing agents than most alkaline proteases. The results exhibited that it effectively removed the stains even in a cold wash and could be considered a decent detergent additive. Furthermore, through protein modelling, the structure of this protease was generated from template, subtilisin E of Bacillus subtilis (PDB ID: 3WHI), and different methods checked its quality. For the first time, this study reported the protein sequence for psychrotrophic Apr-BO1 and brought forth its novelty among other cold-active proteases.
url https://doi.org/10.1038/s41598-021-92197-w
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