Linear-time protein 3-D structure searching with insertions and deletions

<p>Abstract</p> <p>Background</p> <p>Two biomolecular 3-D structures are said to be similar if the RMSD (root mean square deviation) between the two molecules' sequences of 3-D coordinates is less than or equal to some given constant bound. Tools for searching for...

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Bibliographic Details
Main Authors: Jansson Jesper, Shibuya Tetsuo, Sadakane Kunihiko
Format: Article
Language:English
Published: BMC 2010-01-01
Series:Algorithms for Molecular Biology
Online Access:http://www.almob.org/content/5/1/7