Core column prediction for protein multiple sequence alignments
Abstract Background In a computed protein multiple sequence alignment, the coreness of a column is the fraction of its substitutions that are in so-called core columns of the gold-standard reference alignment of its proteins. In benchmark suites of protein reference alignments, the core columns of t...
Main Authors: | Dan DeBlasio, John Kececioglu |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2017-04-01
|
Series: | Algorithms for Molecular Biology |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s13015-017-0102-3 |
Similar Items
-
Core column prediction for protein multiple sequence alignments
by: DeBlasio, Dan, et al.
Published: (2017) -
Comparison of Short-Read Sequence Aligners Indicates Strengths and Weaknesses for Biologists to Consider
by: Ryan Musich, et al.
Published: (2021-04-01) -
LMAP_S: Lightweight Multigene Alignment and Phylogeny eStimation
by: Emanuel Maldonado, et al.
Published: (2019-12-01) -
An Improved Parallel Multiple Sequence Alignment Algorithm on Multi-core System
by: Mohammed W. Al-Neama, et al.
Published: (2017-08-01) -
Multiple Biolgical Sequence Alignment: Scoring Functions, Algorithms, and Evaluations
by: Nguyen, Ken D
Published: (2011)