Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients
Purpose: The construction and validation of a radiomics nomogram based on machine learning using magnetic resonance image (MRI) for predicting the efficacy of neoadjuvant chemotherapy (NACT) in patients with breast cancer (BCa).Methods: This retrospective investigation consisted of 158 patients who...
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Frontiers Media S.A.
2020-08-01
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Series: | Frontiers in Oncology |
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Online Access: | https://www.frontiersin.org/article/10.3389/fonc.2020.01410/full |
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Article |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Shujun Chen Shujun Chen Shujun Chen Zhenyu Shu Yongfeng Li Yongfeng Li Yongfeng Li Bo Chen Bo Chen Bo Chen Lirong Tang Lirong Tang Lirong Tang Wenju Mo Wenju Mo Wenju Mo Guoliang Shao Guoliang Shao Guoliang Shao Feng Shao Feng Shao Feng Shao |
spellingShingle |
Shujun Chen Shujun Chen Shujun Chen Zhenyu Shu Yongfeng Li Yongfeng Li Yongfeng Li Bo Chen Bo Chen Bo Chen Lirong Tang Lirong Tang Lirong Tang Wenju Mo Wenju Mo Wenju Mo Guoliang Shao Guoliang Shao Guoliang Shao Feng Shao Feng Shao Feng Shao Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients Frontiers in Oncology radiomics nomogram breast cancer neoadjuvant chemotherapy pathological complete response machine learning |
author_facet |
Shujun Chen Shujun Chen Shujun Chen Zhenyu Shu Yongfeng Li Yongfeng Li Yongfeng Li Bo Chen Bo Chen Bo Chen Lirong Tang Lirong Tang Lirong Tang Wenju Mo Wenju Mo Wenju Mo Guoliang Shao Guoliang Shao Guoliang Shao Feng Shao Feng Shao Feng Shao |
author_sort |
Shujun Chen |
title |
Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients |
title_short |
Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients |
title_full |
Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients |
title_fullStr |
Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients |
title_full_unstemmed |
Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients |
title_sort |
machine learning-based radiomics nomogram using magnetic resonance images for prediction of neoadjuvant chemotherapy efficacy in breast cancer patients |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Oncology |
issn |
2234-943X |
publishDate |
2020-08-01 |
description |
Purpose: The construction and validation of a radiomics nomogram based on machine learning using magnetic resonance image (MRI) for predicting the efficacy of neoadjuvant chemotherapy (NACT) in patients with breast cancer (BCa).Methods: This retrospective investigation consisted of 158 patients who were diagnosed with BCa and underwent MRI before NACT, of which 33 patients experienced pathological complete response (pCR) by the postoperative pathological examination. The patients with BCa were divided into the training set (n = 110) and test set (n = 48) randomly. The features were selected by the maximum relevance minimum redundancy (mRMR) and absolute shrinkage and selection operator (LASSO) algorithm in the training set. In return, the radiomics signature was established using machine learning. The predictive score of each patient was calculated using the radiomics signature formula. Finally, the predictive scores and clinical factors were used to perform the multivariate logistic regression and construct the nomogram. Receiver operating characteristics (ROC) analyses were used to assess and validate the diagnostic accuracy of the nomogram in the test set. Lastly, the usefulness of the nomogram was confirmed via decision curve analysis (DCA).Results: The radiomics signature was well-discriminated in the training set [AUC 0.835, specificity 71.32%, and sensitivity 82.61%], and test set (AUC 0.834, specificity 73.21%, and sensitivity 80%). Containing the radiomics signature and hormone status, the radiomics nomogram showed good calibration and discrimination in the training set [AUC 0.888, specificity 79.31%, and sensitivity 86.96%] and test set (AUC 0.879, specificity 82.19%, and sensitivity 83.57%). The decision curve indicated the clinical usefulness of our nomogram.Conclusion: Our radiomics nomogram showed good discrimination in patients with BCa who experience pCR after NACT. The model may aid physicians in predicting how specific patients may respond to BCa treatments in the future. |
topic |
radiomics nomogram breast cancer neoadjuvant chemotherapy pathological complete response machine learning |
url |
https://www.frontiersin.org/article/10.3389/fonc.2020.01410/full |
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doaj-76a60da835f7410ba41eb6c84eb41c302020-11-25T02:54:52ZengFrontiers Media S.A.Frontiers in Oncology2234-943X2020-08-011010.3389/fonc.2020.01410516233Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer PatientsShujun Chen0Shujun Chen1Shujun Chen2Zhenyu Shu3Yongfeng Li4Yongfeng Li5Yongfeng Li6Bo Chen7Bo Chen8Bo Chen9Lirong Tang10Lirong Tang11Lirong Tang12Wenju Mo13Wenju Mo14Wenju Mo15Guoliang Shao16Guoliang Shao17Guoliang Shao18Feng Shao19Feng Shao20Feng Shao21Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, ChinaInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, ChinaDepartment of Radiology, Zhejiang Cancer Hospital, Hangzhou, ChinaDepartment of Radiology, Zhejiang Provincial People's Hospital, Affiliated People's Hospital of Hangzhou Medical College, Hangzhou, ChinaCancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, ChinaInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, ChinaDepartment of Breast Surgery, Zhejiang Cancer Hospital, Hangzhou, ChinaCancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, ChinaInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, ChinaDepartment of Pathology, Zhejiang Cancer Hospital, Hangzhou, ChinaCancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, ChinaInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, ChinaDepartment of Radiology, Zhejiang Cancer Hospital, Hangzhou, ChinaCancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, ChinaInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, ChinaDepartment of Breast Surgery, Zhejiang Cancer Hospital, Hangzhou, ChinaCancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, ChinaInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, ChinaDepartment of Radiology, Zhejiang Cancer Hospital, Hangzhou, ChinaCancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, ChinaInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, ChinaDepartment of Gynecological Oncology, Zhejiang Cancer Hospital, Hangzhou, ChinaPurpose: The construction and validation of a radiomics nomogram based on machine learning using magnetic resonance image (MRI) for predicting the efficacy of neoadjuvant chemotherapy (NACT) in patients with breast cancer (BCa).Methods: This retrospective investigation consisted of 158 patients who were diagnosed with BCa and underwent MRI before NACT, of which 33 patients experienced pathological complete response (pCR) by the postoperative pathological examination. The patients with BCa were divided into the training set (n = 110) and test set (n = 48) randomly. The features were selected by the maximum relevance minimum redundancy (mRMR) and absolute shrinkage and selection operator (LASSO) algorithm in the training set. In return, the radiomics signature was established using machine learning. The predictive score of each patient was calculated using the radiomics signature formula. Finally, the predictive scores and clinical factors were used to perform the multivariate logistic regression and construct the nomogram. Receiver operating characteristics (ROC) analyses were used to assess and validate the diagnostic accuracy of the nomogram in the test set. Lastly, the usefulness of the nomogram was confirmed via decision curve analysis (DCA).Results: The radiomics signature was well-discriminated in the training set [AUC 0.835, specificity 71.32%, and sensitivity 82.61%], and test set (AUC 0.834, specificity 73.21%, and sensitivity 80%). Containing the radiomics signature and hormone status, the radiomics nomogram showed good calibration and discrimination in the training set [AUC 0.888, specificity 79.31%, and sensitivity 86.96%] and test set (AUC 0.879, specificity 82.19%, and sensitivity 83.57%). The decision curve indicated the clinical usefulness of our nomogram.Conclusion: Our radiomics nomogram showed good discrimination in patients with BCa who experience pCR after NACT. The model may aid physicians in predicting how specific patients may respond to BCa treatments in the future.https://www.frontiersin.org/article/10.3389/fonc.2020.01410/fullradiomicsnomogrambreast cancerneoadjuvant chemotherapypathological complete responsemachine learning |