Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers

Electrophysiological methods, that is M/EEG, provide unique views into brain health. Yet, when building predictive models from brain data, it is often unclear how electrophysiology should be combined with other neuroimaging methods. Information can be redundant, useful common representations of mult...

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Main Authors: Denis A Engemann, Oleh Kozynets, David Sabbagh, Guillaume Lemaître, Gael Varoquaux, Franziskus Liem, Alexandre Gramfort
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2020-05-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/54055
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spelling doaj-76539ca602764acdb7d04b251b5d9bd32021-05-05T21:07:12ZengeLife Sciences Publications LtdeLife2050-084X2020-05-01910.7554/eLife.54055Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkersDenis A Engemann0https://orcid.org/0000-0002-7223-1014Oleh Kozynets1David Sabbagh2Guillaume Lemaître3Gael Varoquaux4https://orcid.org/0000-0003-1076-5122Franziskus Liem5Alexandre Gramfort6Université Paris-Saclay, Inria, CEA, Palaiseau, France; Department of Neurology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, GermanyUniversité Paris-Saclay, Inria, CEA, Palaiseau, FranceUniversité Paris-Saclay, Inria, CEA, Palaiseau, France; Inserm, UMRS-942, Paris Diderot University, Paris, France; Department of Anaesthesiology and Critical Care, Lariboisière Hospital, Assistance Publique Hôpitaux de Paris, Paris, FranceUniversité Paris-Saclay, Inria, CEA, Palaiseau, FranceUniversité Paris-Saclay, Inria, CEA, Palaiseau, FranceUniversity Research Priority Program Dynamics of Healthy Aging, University of Zürich, Zürich, SwitzerlandUniversité Paris-Saclay, Inria, CEA, Palaiseau, FranceElectrophysiological methods, that is M/EEG, provide unique views into brain health. Yet, when building predictive models from brain data, it is often unclear how electrophysiology should be combined with other neuroimaging methods. Information can be redundant, useful common representations of multimodal data may not be obvious and multimodal data collection can be medically contraindicated, which reduces applicability. Here, we propose a multimodal model to robustly combine MEG, MRI and fMRI for prediction. We focus on age prediction as a surrogate biomarker in 674 subjects from the Cam-CAN dataset. Strikingly, MEG, fMRI and MRI showed additive effects supporting distinct brain-behavior associations. Moreover, the contribution of MEG was best explained by cortical power spectra between 8 and 30 Hz. Finally, we demonstrate that the model preserves benefits of stacking when some data is missing. The proposed framework, hence, enables multimodal learning for a wide range of biomarkers from diverse types of brain signals.https://elifesciences.org/articles/54055biomarkeragingmagnetic resonance imagingmagnetoencephalogrphyoscillationsmachine learning
collection DOAJ
language English
format Article
sources DOAJ
author Denis A Engemann
Oleh Kozynets
David Sabbagh
Guillaume Lemaître
Gael Varoquaux
Franziskus Liem
Alexandre Gramfort
spellingShingle Denis A Engemann
Oleh Kozynets
David Sabbagh
Guillaume Lemaître
Gael Varoquaux
Franziskus Liem
Alexandre Gramfort
Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers
eLife
biomarker
aging
magnetic resonance imaging
magnetoencephalogrphy
oscillations
machine learning
author_facet Denis A Engemann
Oleh Kozynets
David Sabbagh
Guillaume Lemaître
Gael Varoquaux
Franziskus Liem
Alexandre Gramfort
author_sort Denis A Engemann
title Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers
title_short Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers
title_full Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers
title_fullStr Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers
title_full_unstemmed Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers
title_sort combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers
publisher eLife Sciences Publications Ltd
series eLife
issn 2050-084X
publishDate 2020-05-01
description Electrophysiological methods, that is M/EEG, provide unique views into brain health. Yet, when building predictive models from brain data, it is often unclear how electrophysiology should be combined with other neuroimaging methods. Information can be redundant, useful common representations of multimodal data may not be obvious and multimodal data collection can be medically contraindicated, which reduces applicability. Here, we propose a multimodal model to robustly combine MEG, MRI and fMRI for prediction. We focus on age prediction as a surrogate biomarker in 674 subjects from the Cam-CAN dataset. Strikingly, MEG, fMRI and MRI showed additive effects supporting distinct brain-behavior associations. Moreover, the contribution of MEG was best explained by cortical power spectra between 8 and 30 Hz. Finally, we demonstrate that the model preserves benefits of stacking when some data is missing. The proposed framework, hence, enables multimodal learning for a wide range of biomarkers from diverse types of brain signals.
topic biomarker
aging
magnetic resonance imaging
magnetoencephalogrphy
oscillations
machine learning
url https://elifesciences.org/articles/54055
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