Mining Discriminative K-Mers in DNA Sequences Using Sketches and Hardware Acceleration
Extracting discriminative k-mers is an important and challenging problem in DNA sequence analysis with applications in metagenomics and motif discovery. Despite the availability of multiple computational tools designed for this purpose, most discriminative k-mer discovery methods suffer from long ex...
Main Authors: | Antonio Saavedra, Hans Lehnert, Cecilia Hernandez, Gonzalo Carvajal, Miguel Figueroa |
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Format: | Article |
Language: | English |
Published: |
IEEE
2020-01-01
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Series: | IEEE Access |
Subjects: | |
Online Access: | https://ieeexplore.ieee.org/document/9122013/ |
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