A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour Images

Background. Atypical vascular pattern is one of the most important features by differentiating between benign and malignant pigmented skin lesions. Detection and analysis of vascular structures is a necessary initial step for skin mole assessment; it is a prerequisite step to provide an accurate out...

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Main Author: Joanna Jaworek-Korjakowska
Format: Article
Language:English
Published: Hindawi Limited 2018-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2018/5049390
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spelling doaj-73bdefc5255145b7aaa365d3a47200ae2020-11-25T00:59:05ZengHindawi LimitedBioMed Research International2314-61332314-61412018-01-01201810.1155/2018/50493905049390A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour ImagesJoanna Jaworek-Korjakowska0Department of Automatic Control and Robotics, AGH University of Science and Technology, Cracow, PolandBackground. Atypical vascular pattern is one of the most important features by differentiating between benign and malignant pigmented skin lesions. Detection and analysis of vascular structures is a necessary initial step for skin mole assessment; it is a prerequisite step to provide an accurate outcome for the widely used 7-point checklist diagnostic algorithm. Methods. In this research we present a fully automated machine learning approach for segmenting vascular structures in dermoscopy colour images. The U-Net architecture is based on convolutional networks and designed for fast and precise segmentation of images. After preprocessing the images are randomly divided into 146516 patches of 64×64 pixels each. Results. On the independent validation dataset including 74 images our implemented method showed high segmentation accuracy. For the U-Net convolutional neural network, an average DSC of 0.84, sensitivity 0.85, and specificity 0.81 has been achieved. Conclusion. Vascular structures due to small size and similarity to other local structures create enormous difficulties during the segmentation and assessment process. The use of advanced segmentation methods like deep learning, especially convolutional neural networks, has the potential to improve the accuracy of advanced local structure detection.http://dx.doi.org/10.1155/2018/5049390
collection DOAJ
language English
format Article
sources DOAJ
author Joanna Jaworek-Korjakowska
spellingShingle Joanna Jaworek-Korjakowska
A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour Images
BioMed Research International
author_facet Joanna Jaworek-Korjakowska
author_sort Joanna Jaworek-Korjakowska
title A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour Images
title_short A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour Images
title_full A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour Images
title_fullStr A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour Images
title_full_unstemmed A Deep Learning Approach to Vascular Structure Segmentation in Dermoscopy Colour Images
title_sort deep learning approach to vascular structure segmentation in dermoscopy colour images
publisher Hindawi Limited
series BioMed Research International
issn 2314-6133
2314-6141
publishDate 2018-01-01
description Background. Atypical vascular pattern is one of the most important features by differentiating between benign and malignant pigmented skin lesions. Detection and analysis of vascular structures is a necessary initial step for skin mole assessment; it is a prerequisite step to provide an accurate outcome for the widely used 7-point checklist diagnostic algorithm. Methods. In this research we present a fully automated machine learning approach for segmenting vascular structures in dermoscopy colour images. The U-Net architecture is based on convolutional networks and designed for fast and precise segmentation of images. After preprocessing the images are randomly divided into 146516 patches of 64×64 pixels each. Results. On the independent validation dataset including 74 images our implemented method showed high segmentation accuracy. For the U-Net convolutional neural network, an average DSC of 0.84, sensitivity 0.85, and specificity 0.81 has been achieved. Conclusion. Vascular structures due to small size and similarity to other local structures create enormous difficulties during the segmentation and assessment process. The use of advanced segmentation methods like deep learning, especially convolutional neural networks, has the potential to improve the accuracy of advanced local structure detection.
url http://dx.doi.org/10.1155/2018/5049390
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AT joannajaworekkorjakowska deeplearningapproachtovascularstructuresegmentationindermoscopycolourimages
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