Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators

Understanding the molecular mechanisms underpinning the ecological success of plant pathogens is critical to develop strategies for controlling diseases and protecting crops. Recent observations have shown that plant pathogenic bacteria, particularly Pseudomonas, exist in a range of natural environm...

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Main Authors: Federico Dorati, Glyn A. Barrett, Maria Sanchez-Contreras, Tanya Arseneault, Mateo San José, David J. Studholme, Jesús Murillo, Primitivo Caballero, Nicholas R. Waterfield, Dawn L. Arnold, Liz J. Shaw, Robert W. Jackson
Format: Article
Language:English
Published: MDPI AG 2018-04-01
Series:Microorganisms
Subjects:
RVA
Online Access:http://www.mdpi.com/2076-2607/6/2/32
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spelling doaj-73acd26157a74a9499722903287b09b32020-11-24T20:45:12ZengMDPI AGMicroorganisms2076-26072018-04-01623210.3390/microorganisms6020032microorganisms6020032Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or PredatorsFederico Dorati0Glyn A. Barrett1Maria Sanchez-Contreras2Tanya Arseneault3Mateo San José4David J. Studholme5Jesús Murillo6Primitivo Caballero7Nicholas R. Waterfield8Dawn L. Arnold9Liz J. Shaw10Robert W. Jackson11School of Biological Sciences, University of Reading, Reading, RG6 6UR, UKSchool of Biological Sciences, University of Reading, Reading, RG6 6UR, UKDepartment of Biology and Biochemistry, University of Bath, Bath, BA1 9BJ, UKSchool of Biological Sciences, University of Reading, Reading, RG6 6UR, UKSchool of Biological Sciences, University of Reading, Reading, RG6 6UR, UKSchool of Biosciences, University of Exeter, Exeter, EX4 4QD, UKInstituto de Agrobiotecnología, Universidad Pública de Navarra, 31192 Mutilva, SpainInstituto de Agrobiotecnología, Universidad Pública de Navarra, 31192 Mutilva, SpainDepartment of Biology and Biochemistry, University of Bath, Bath, BA1 9BJ, UKCentre for Research in Bioscience, Faculty of Health and Applied Sciences, University of the West of England, Bristol, BS16 1QY, UKSchool of Archaeology, Geography and Environmental Science, University of Reading, Reading, RG6 6AX, UKSchool of Biological Sciences, University of Reading, Reading, RG6 6UR, UKUnderstanding the molecular mechanisms underpinning the ecological success of plant pathogens is critical to develop strategies for controlling diseases and protecting crops. Recent observations have shown that plant pathogenic bacteria, particularly Pseudomonas, exist in a range of natural environments away from their natural plant host e.g., water courses, soil, non-host plants. This exposes them to a variety of eukaryotic predators such as nematodes, insects and amoebae present in the environment. Nematodes and amoeba in particular are bacterial predators while insect herbivores may act as indirect predators, ingesting bacteria on plant tissue. We therefore postulated that bacteria are probably under selective pressure to avoid or survive predation and have therefore developed appropriate coping mechanisms. We tested the hypothesis that plant pathogenic Pseudomonas syringae are able to cope with predation pressure and found that three pathovars show weak, but significant resistance or toxicity. To identify the gene systems that contribute to resistance or toxicity we applied a heterologous screening technique, called Rapid Virulence Annotation (RVA), for anti-predation and toxicity mechanisms. Three cosmid libraries for P. syringae pv. aesculi, pv. tomato and pv. phaseolicola, of approximately 2000 cosmids each, were screened in the susceptible/non-toxic bacterium Escherichia coli against nematode, amoebae and an insect. A number of potential conserved and unique genes were identified which included genes encoding haemolysins, biofilm formation, motility and adhesion. These data provide the first multi-pathovar comparative insight to how plant pathogens cope with different predation pressures and infection of an insect gut and provide a foundation for further study into the function of selected genes and their role in ecological success.http://www.mdpi.com/2076-2607/6/2/32Pseudomonas syringaerapid virulence annotationRVApathogenanti-predationCaenorhabditis elegansAcanthamoeba polyphagaGalleria mellonella
collection DOAJ
language English
format Article
sources DOAJ
author Federico Dorati
Glyn A. Barrett
Maria Sanchez-Contreras
Tanya Arseneault
Mateo San José
David J. Studholme
Jesús Murillo
Primitivo Caballero
Nicholas R. Waterfield
Dawn L. Arnold
Liz J. Shaw
Robert W. Jackson
spellingShingle Federico Dorati
Glyn A. Barrett
Maria Sanchez-Contreras
Tanya Arseneault
Mateo San José
David J. Studholme
Jesús Murillo
Primitivo Caballero
Nicholas R. Waterfield
Dawn L. Arnold
Liz J. Shaw
Robert W. Jackson
Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators
Microorganisms
Pseudomonas syringae
rapid virulence annotation
RVA
pathogen
anti-predation
Caenorhabditis elegans
Acanthamoeba polyphaga
Galleria mellonella
author_facet Federico Dorati
Glyn A. Barrett
Maria Sanchez-Contreras
Tanya Arseneault
Mateo San José
David J. Studholme
Jesús Murillo
Primitivo Caballero
Nicholas R. Waterfield
Dawn L. Arnold
Liz J. Shaw
Robert W. Jackson
author_sort Federico Dorati
title Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators
title_short Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators
title_full Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators
title_fullStr Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators
title_full_unstemmed Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators
title_sort coping with environmental eukaryotes; identification of pseudomonas syringae genes during the interaction with alternative hosts or predators
publisher MDPI AG
series Microorganisms
issn 2076-2607
publishDate 2018-04-01
description Understanding the molecular mechanisms underpinning the ecological success of plant pathogens is critical to develop strategies for controlling diseases and protecting crops. Recent observations have shown that plant pathogenic bacteria, particularly Pseudomonas, exist in a range of natural environments away from their natural plant host e.g., water courses, soil, non-host plants. This exposes them to a variety of eukaryotic predators such as nematodes, insects and amoebae present in the environment. Nematodes and amoeba in particular are bacterial predators while insect herbivores may act as indirect predators, ingesting bacteria on plant tissue. We therefore postulated that bacteria are probably under selective pressure to avoid or survive predation and have therefore developed appropriate coping mechanisms. We tested the hypothesis that plant pathogenic Pseudomonas syringae are able to cope with predation pressure and found that three pathovars show weak, but significant resistance or toxicity. To identify the gene systems that contribute to resistance or toxicity we applied a heterologous screening technique, called Rapid Virulence Annotation (RVA), for anti-predation and toxicity mechanisms. Three cosmid libraries for P. syringae pv. aesculi, pv. tomato and pv. phaseolicola, of approximately 2000 cosmids each, were screened in the susceptible/non-toxic bacterium Escherichia coli against nematode, amoebae and an insect. A number of potential conserved and unique genes were identified which included genes encoding haemolysins, biofilm formation, motility and adhesion. These data provide the first multi-pathovar comparative insight to how plant pathogens cope with different predation pressures and infection of an insect gut and provide a foundation for further study into the function of selected genes and their role in ecological success.
topic Pseudomonas syringae
rapid virulence annotation
RVA
pathogen
anti-predation
Caenorhabditis elegans
Acanthamoeba polyphaga
Galleria mellonella
url http://www.mdpi.com/2076-2607/6/2/32
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