High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT Glioblastomas

World Health Organization grade IV diffuse gliomas, known as glioblastomas, are the most common malignant brain tumors, and they show poor prognosis. Multimodal treatment of surgery followed by radiation and chemotherapy is not sufficient to increase patient survival, which is 12 to 18 months after...

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Main Authors: Ivana Jovčevska, Alja Zottel, Neja Šamec, Jernej Mlakar, Maxim Sorokin, Daniil Nikitin, Anton A. Buzdin, Radovan Komel
Format: Article
Language:English
Published: MDPI AG 2019-07-01
Series:Cancers
Subjects:
Online Access:https://www.mdpi.com/2072-6694/11/8/1060
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spelling doaj-7262ddee625a41c6a016e745b24a1cfc2020-11-24T21:22:11ZengMDPI AGCancers2072-66942019-07-01118106010.3390/cancers11081060cancers11081060High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT GlioblastomasIvana Jovčevska0Alja Zottel1Neja Šamec2Jernej Mlakar3Maxim Sorokin4Daniil Nikitin5Anton A. Buzdin6Radovan Komel7Medical Centre for Molecular Biology, Institute of Biochemistry, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, SloveniaMedical Centre for Molecular Biology, Institute of Biochemistry, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, SloveniaMedical Centre for Molecular Biology, Institute of Biochemistry, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, SloveniaInstitute of Pathology, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, SloveniaLaboratory of Clinical and Genomic Bioinformatics, I. M. Sechenov First Moscow State Medical University, 119146 Moscow, RussiaLaboratory of Clinical and Genomic Bioinformatics, I. M. Sechenov First Moscow State Medical University, 119146 Moscow, RussiaLaboratory of Clinical and Genomic Bioinformatics, I. M. Sechenov First Moscow State Medical University, 119146 Moscow, RussiaMedical Centre for Molecular Biology, Institute of Biochemistry, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, SloveniaWorld Health Organization grade IV diffuse gliomas, known as glioblastomas, are the most common malignant brain tumors, and they show poor prognosis. Multimodal treatment of surgery followed by radiation and chemotherapy is not sufficient to increase patient survival, which is 12 to 18 months after diagnosis. Despite extensive research, patient life expectancy has not significantly improved over the last decade. Previously, we identified <i>FREM2</i> and <i>SPRY1</i> as genes with differential expression in glioblastoma cell lines compared to nonmalignant astrocytes. In addition, the <i>FREM2</i> and <i>SPRY1</i> proteins show specific localization on the surface of glioblastoma cells. In this study, we explored the roles of the <i>FREM2</i> and <i>SPRY1</i> genes and their proteins in glioblastoma pathology using human tissue samples. We used proteomic, transcriptomic, and bioinformatics approaches to detect changes at different molecular levels. We demonstrate increased FREM2 protein expression levels in glioblastomas compared to reference samples. At the transcriptomic level, both <i>FREM2</i> and <i>SPRY1</i> show increased expression in tissue samples of different glioma grades compared to nonmalignant brain tissue. To broaden our experimental findings, we analyzed The Cancer Genome Atlas glioblastoma patient datasets. We discovered higher <i>FREM2</i> and <i>SPRY1</i> gene expression levels in glioblastomas compared to lower grade gliomas and reference samples. In addition, we observed that low <i>FREM2</i> expression was associated with progression of <i>IDH</i>-mutant low-grade glioma patients. Multivariate analysis showed positive association between <i>FREM2</i> and favorable prognosis of <i>IDH</i>-wild type glioblastoma. We conclude that <i>FREM2</i> has an important role in malignant progression of glioblastoma, and we suggest deeper analysis to determine its involvement in glioblastoma pathology.https://www.mdpi.com/2072-6694/11/8/1060glioblastomamalignancy<i>FREM2</i><i>SPRY1</i>TCGA
collection DOAJ
language English
format Article
sources DOAJ
author Ivana Jovčevska
Alja Zottel
Neja Šamec
Jernej Mlakar
Maxim Sorokin
Daniil Nikitin
Anton A. Buzdin
Radovan Komel
spellingShingle Ivana Jovčevska
Alja Zottel
Neja Šamec
Jernej Mlakar
Maxim Sorokin
Daniil Nikitin
Anton A. Buzdin
Radovan Komel
High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT Glioblastomas
Cancers
glioblastoma
malignancy
<i>FREM2</i>
<i>SPRY1</i>
TCGA
author_facet Ivana Jovčevska
Alja Zottel
Neja Šamec
Jernej Mlakar
Maxim Sorokin
Daniil Nikitin
Anton A. Buzdin
Radovan Komel
author_sort Ivana Jovčevska
title High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT Glioblastomas
title_short High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT Glioblastomas
title_full High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT Glioblastomas
title_fullStr High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT Glioblastomas
title_full_unstemmed High <i>FREM2</i> Gene and Protein Expression Are Associated with Favorable Prognosis of <i>IDH</i>-WT Glioblastomas
title_sort high <i>frem2</i> gene and protein expression are associated with favorable prognosis of <i>idh</i>-wt glioblastomas
publisher MDPI AG
series Cancers
issn 2072-6694
publishDate 2019-07-01
description World Health Organization grade IV diffuse gliomas, known as glioblastomas, are the most common malignant brain tumors, and they show poor prognosis. Multimodal treatment of surgery followed by radiation and chemotherapy is not sufficient to increase patient survival, which is 12 to 18 months after diagnosis. Despite extensive research, patient life expectancy has not significantly improved over the last decade. Previously, we identified <i>FREM2</i> and <i>SPRY1</i> as genes with differential expression in glioblastoma cell lines compared to nonmalignant astrocytes. In addition, the <i>FREM2</i> and <i>SPRY1</i> proteins show specific localization on the surface of glioblastoma cells. In this study, we explored the roles of the <i>FREM2</i> and <i>SPRY1</i> genes and their proteins in glioblastoma pathology using human tissue samples. We used proteomic, transcriptomic, and bioinformatics approaches to detect changes at different molecular levels. We demonstrate increased FREM2 protein expression levels in glioblastomas compared to reference samples. At the transcriptomic level, both <i>FREM2</i> and <i>SPRY1</i> show increased expression in tissue samples of different glioma grades compared to nonmalignant brain tissue. To broaden our experimental findings, we analyzed The Cancer Genome Atlas glioblastoma patient datasets. We discovered higher <i>FREM2</i> and <i>SPRY1</i> gene expression levels in glioblastomas compared to lower grade gliomas and reference samples. In addition, we observed that low <i>FREM2</i> expression was associated with progression of <i>IDH</i>-mutant low-grade glioma patients. Multivariate analysis showed positive association between <i>FREM2</i> and favorable prognosis of <i>IDH</i>-wild type glioblastoma. We conclude that <i>FREM2</i> has an important role in malignant progression of glioblastoma, and we suggest deeper analysis to determine its involvement in glioblastoma pathology.
topic glioblastoma
malignancy
<i>FREM2</i>
<i>SPRY1</i>
TCGA
url https://www.mdpi.com/2072-6694/11/8/1060
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