A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents
The dynamics of hepatitis C virus (HCV) RNA during translation and replication within infected cells were added to a previous age-structured multiscale mathematical model of HCV infection and treatment. The model allows the study of the dynamics of HCV RNA inside infected cells as well as the releas...
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doaj-72491e4f9d2c46549a75d5bffd6e06fd2020-11-24T22:24:46ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2018-04-01910.3389/fmicb.2018.00601348636A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral AgentsBarbara de M. Quintela0Jessica M. Conway1James M. Hyman2Jeremie Guedj3Rodrigo W. dos Santos4Marcelo Lobosco5Alan S. Perelson6FISIOCOMP Laboratory, PPGMC, Universidade Federal de Juiz de Fora, Juiz de Fora, BrazilDepartment of Mathematics and Center for Infectious Disease Dynamics, The Pennsylvania State University, State College, PA, United StatesMathematics Department, Tulane University, New Orleans, LA, United StatesIAME, UMR 1137, Institut National de la Santé et de la Recherche Médicale, Université Paris Diderot, Sorbonne Paris Cité, Paris, FranceFISIOCOMP Laboratory, PPGMC, Universidade Federal de Juiz de Fora, Juiz de Fora, BrazilFISIOCOMP Laboratory, PPGMC, Universidade Federal de Juiz de Fora, Juiz de Fora, BrazilTheoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, NM, United StatesThe dynamics of hepatitis C virus (HCV) RNA during translation and replication within infected cells were added to a previous age-structured multiscale mathematical model of HCV infection and treatment. The model allows the study of the dynamics of HCV RNA inside infected cells as well as the release of virus from infected cells and the dynamics of subsequent new cell infections. The model was used to fit in vitro data and estimate parameters characterizing HCV replication. This is the first model to our knowledge to consider both positive and negative strands of HCV RNA with an age-structured multiscale modeling approach. Using this model we also studied the effects of direct-acting antiviral agents (DAAs) in blocking HCV RNA intracellular replication and the release of new virions and fit the model to in vivo data obtained from HCV-infected subjects under therapy.http://journal.frontiersin.org/article/10.3389/fmicb.2018.00601/fullcomputational biologyHCVRNADAAsdifferential equations |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Barbara de M. Quintela Jessica M. Conway James M. Hyman Jeremie Guedj Rodrigo W. dos Santos Marcelo Lobosco Alan S. Perelson |
spellingShingle |
Barbara de M. Quintela Jessica M. Conway James M. Hyman Jeremie Guedj Rodrigo W. dos Santos Marcelo Lobosco Alan S. Perelson A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents Frontiers in Microbiology computational biology HCV RNA DAAs differential equations |
author_facet |
Barbara de M. Quintela Jessica M. Conway James M. Hyman Jeremie Guedj Rodrigo W. dos Santos Marcelo Lobosco Alan S. Perelson |
author_sort |
Barbara de M. Quintela |
title |
A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents |
title_short |
A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents |
title_full |
A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents |
title_fullStr |
A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents |
title_full_unstemmed |
A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents |
title_sort |
new age-structured multiscale model of the hepatitis c virus life-cycle during infection and therapy with direct-acting antiviral agents |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Microbiology |
issn |
1664-302X |
publishDate |
2018-04-01 |
description |
The dynamics of hepatitis C virus (HCV) RNA during translation and replication within infected cells were added to a previous age-structured multiscale mathematical model of HCV infection and treatment. The model allows the study of the dynamics of HCV RNA inside infected cells as well as the release of virus from infected cells and the dynamics of subsequent new cell infections. The model was used to fit in vitro data and estimate parameters characterizing HCV replication. This is the first model to our knowledge to consider both positive and negative strands of HCV RNA with an age-structured multiscale modeling approach. Using this model we also studied the effects of direct-acting antiviral agents (DAAs) in blocking HCV RNA intracellular replication and the release of new virions and fit the model to in vivo data obtained from HCV-infected subjects under therapy. |
topic |
computational biology HCV RNA DAAs differential equations |
url |
http://journal.frontiersin.org/article/10.3389/fmicb.2018.00601/full |
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