Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy

Optics based technologies are being advanced by many diagnostic companies around the globe. This resurgence is being driven by several factors including novel materials, enhanced computer power, nonlinear optics, and advances in algorithmic and statistical analysis. This study expands on a previous...

Full description

Bibliographic Details
Main Authors: Debra E. Huffman, Yulia M. Serebrennikova, Jennifer M. Smith, Alison Roth, Jack N. Lindon, German F. Leparc, Luis H. Garcia-Rubio
Format: Article
Language:English
Published: Hindawi Limited 2016-01-01
Series:Journal of Spectroscopy
Online Access:http://dx.doi.org/10.1155/2016/5436821
id doaj-6f026ef8260c430a8f3c9d01617a2047
record_format Article
spelling doaj-6f026ef8260c430a8f3c9d01617a20472020-11-24T21:04:30ZengHindawi LimitedJournal of Spectroscopy2314-49202314-49392016-01-01201610.1155/2016/54368215436821Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering SpectroscopyDebra E. Huffman0Yulia M. Serebrennikova1Jennifer M. Smith2Alison Roth3Jack N. Lindon4German F. Leparc5Luis H. Garcia-Rubio6Claro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAUniversity of South Florida, 4202 E. Fowler Avenue, Tampa, FL 33620, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAOneBlood Inc., 10100 MLK Street North, St. Petersburg, FL 33716, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAOptics based technologies are being advanced by many diagnostic companies around the globe. This resurgence is being driven by several factors including novel materials, enhanced computer power, nonlinear optics, and advances in algorithmic and statistical analysis. This study expands on a previous paper that evaluated the capability of a reagent-free optical profiling platform technology that used multiwavelength transmission spectroscopy to identify bacterial pathogens from pure culture. This study combines multiwavelength angular scattering with transmission based analysis into a single algorithm that will identify bacterial pathogens. Six predominant organisms, S. aureus, E. coli, K. pneumoniae and P. aeruginosa, E. faecalis, and coagulase negative Staphylococcus, were analyzed from a total of 753 clinical isolates received from three large community hospital systems. The bacterial identification method used for comparison in this study was the Vitek-2 (bioMerieux) which utilizes a biochemically based identification system. All of the clinical isolates received were blinded as to their identification until completion of the optical analysis. Sensitivities ranged from 87.7 to 94.6% with specificities ranging from 97.2 to 99.9% indicating that optical profiling is a powerful and exciting new technology that could be developed for the rapid identification of pathogens without the use of chemical reagents.http://dx.doi.org/10.1155/2016/5436821
collection DOAJ
language English
format Article
sources DOAJ
author Debra E. Huffman
Yulia M. Serebrennikova
Jennifer M. Smith
Alison Roth
Jack N. Lindon
German F. Leparc
Luis H. Garcia-Rubio
spellingShingle Debra E. Huffman
Yulia M. Serebrennikova
Jennifer M. Smith
Alison Roth
Jack N. Lindon
German F. Leparc
Luis H. Garcia-Rubio
Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy
Journal of Spectroscopy
author_facet Debra E. Huffman
Yulia M. Serebrennikova
Jennifer M. Smith
Alison Roth
Jack N. Lindon
German F. Leparc
Luis H. Garcia-Rubio
author_sort Debra E. Huffman
title Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy
title_short Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy
title_full Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy
title_fullStr Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy
title_full_unstemmed Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy
title_sort reagentless bacterial identification using a combination of multiwavelength transmission and angular scattering spectroscopy
publisher Hindawi Limited
series Journal of Spectroscopy
issn 2314-4920
2314-4939
publishDate 2016-01-01
description Optics based technologies are being advanced by many diagnostic companies around the globe. This resurgence is being driven by several factors including novel materials, enhanced computer power, nonlinear optics, and advances in algorithmic and statistical analysis. This study expands on a previous paper that evaluated the capability of a reagent-free optical profiling platform technology that used multiwavelength transmission spectroscopy to identify bacterial pathogens from pure culture. This study combines multiwavelength angular scattering with transmission based analysis into a single algorithm that will identify bacterial pathogens. Six predominant organisms, S. aureus, E. coli, K. pneumoniae and P. aeruginosa, E. faecalis, and coagulase negative Staphylococcus, were analyzed from a total of 753 clinical isolates received from three large community hospital systems. The bacterial identification method used for comparison in this study was the Vitek-2 (bioMerieux) which utilizes a biochemically based identification system. All of the clinical isolates received were blinded as to their identification until completion of the optical analysis. Sensitivities ranged from 87.7 to 94.6% with specificities ranging from 97.2 to 99.9% indicating that optical profiling is a powerful and exciting new technology that could be developed for the rapid identification of pathogens without the use of chemical reagents.
url http://dx.doi.org/10.1155/2016/5436821
work_keys_str_mv AT debraehuffman reagentlessbacterialidentificationusingacombinationofmultiwavelengthtransmissionandangularscatteringspectroscopy
AT yuliamserebrennikova reagentlessbacterialidentificationusingacombinationofmultiwavelengthtransmissionandangularscatteringspectroscopy
AT jennifermsmith reagentlessbacterialidentificationusingacombinationofmultiwavelengthtransmissionandangularscatteringspectroscopy
AT alisonroth reagentlessbacterialidentificationusingacombinationofmultiwavelengthtransmissionandangularscatteringspectroscopy
AT jacknlindon reagentlessbacterialidentificationusingacombinationofmultiwavelengthtransmissionandangularscatteringspectroscopy
AT germanfleparc reagentlessbacterialidentificationusingacombinationofmultiwavelengthtransmissionandangularscatteringspectroscopy
AT luishgarciarubio reagentlessbacterialidentificationusingacombinationofmultiwavelengthtransmissionandangularscatteringspectroscopy
_version_ 1716770876276342784