Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy
Optics based technologies are being advanced by many diagnostic companies around the globe. This resurgence is being driven by several factors including novel materials, enhanced computer power, nonlinear optics, and advances in algorithmic and statistical analysis. This study expands on a previous...
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Online Access: | http://dx.doi.org/10.1155/2016/5436821 |
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doaj-6f026ef8260c430a8f3c9d01617a20472020-11-24T21:04:30ZengHindawi LimitedJournal of Spectroscopy2314-49202314-49392016-01-01201610.1155/2016/54368215436821Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering SpectroscopyDebra E. Huffman0Yulia M. Serebrennikova1Jennifer M. Smith2Alison Roth3Jack N. Lindon4German F. Leparc5Luis H. Garcia-Rubio6Claro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAUniversity of South Florida, 4202 E. Fowler Avenue, Tampa, FL 33620, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAOneBlood Inc., 10100 MLK Street North, St. Petersburg, FL 33716, USAClaro Scientific LLC, 10100 MLK Street North, St. Petersburg, FL 33716, USAOptics based technologies are being advanced by many diagnostic companies around the globe. This resurgence is being driven by several factors including novel materials, enhanced computer power, nonlinear optics, and advances in algorithmic and statistical analysis. This study expands on a previous paper that evaluated the capability of a reagent-free optical profiling platform technology that used multiwavelength transmission spectroscopy to identify bacterial pathogens from pure culture. This study combines multiwavelength angular scattering with transmission based analysis into a single algorithm that will identify bacterial pathogens. Six predominant organisms, S. aureus, E. coli, K. pneumoniae and P. aeruginosa, E. faecalis, and coagulase negative Staphylococcus, were analyzed from a total of 753 clinical isolates received from three large community hospital systems. The bacterial identification method used for comparison in this study was the Vitek-2 (bioMerieux) which utilizes a biochemically based identification system. All of the clinical isolates received were blinded as to their identification until completion of the optical analysis. Sensitivities ranged from 87.7 to 94.6% with specificities ranging from 97.2 to 99.9% indicating that optical profiling is a powerful and exciting new technology that could be developed for the rapid identification of pathogens without the use of chemical reagents.http://dx.doi.org/10.1155/2016/5436821 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Debra E. Huffman Yulia M. Serebrennikova Jennifer M. Smith Alison Roth Jack N. Lindon German F. Leparc Luis H. Garcia-Rubio |
spellingShingle |
Debra E. Huffman Yulia M. Serebrennikova Jennifer M. Smith Alison Roth Jack N. Lindon German F. Leparc Luis H. Garcia-Rubio Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy Journal of Spectroscopy |
author_facet |
Debra E. Huffman Yulia M. Serebrennikova Jennifer M. Smith Alison Roth Jack N. Lindon German F. Leparc Luis H. Garcia-Rubio |
author_sort |
Debra E. Huffman |
title |
Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy |
title_short |
Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy |
title_full |
Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy |
title_fullStr |
Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy |
title_full_unstemmed |
Reagentless Bacterial Identification Using a Combination of Multiwavelength Transmission and Angular Scattering Spectroscopy |
title_sort |
reagentless bacterial identification using a combination of multiwavelength transmission and angular scattering spectroscopy |
publisher |
Hindawi Limited |
series |
Journal of Spectroscopy |
issn |
2314-4920 2314-4939 |
publishDate |
2016-01-01 |
description |
Optics based technologies are being advanced by many diagnostic companies around the globe. This resurgence is being driven by several factors including novel materials, enhanced computer power, nonlinear optics, and advances in algorithmic and statistical analysis. This study expands on a previous paper that evaluated the capability of a reagent-free optical profiling platform technology that used multiwavelength transmission spectroscopy to identify bacterial pathogens from pure culture. This study combines multiwavelength angular scattering with transmission based analysis into a single algorithm that will identify bacterial pathogens. Six predominant organisms, S. aureus, E. coli, K. pneumoniae and P. aeruginosa, E. faecalis, and coagulase negative Staphylococcus, were analyzed from a total of 753 clinical isolates received from three large community hospital systems. The bacterial identification method used for comparison in this study was the Vitek-2 (bioMerieux) which utilizes a biochemically based identification system. All of the clinical isolates received were blinded as to their identification until completion of the optical analysis. Sensitivities ranged from 87.7 to 94.6% with specificities ranging from 97.2 to 99.9% indicating that optical profiling is a powerful and exciting new technology that could be developed for the rapid identification of pathogens without the use of chemical reagents. |
url |
http://dx.doi.org/10.1155/2016/5436821 |
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