Modeling observations with a detection limit using a truncated normal distribution with censoring

Abstract Background When data are collected subject to a detection limit, observations below the detection limit may be considered censored. In addition, the domain of such observations may be restricted; for example, values may be required to be non-negative. Methods We propose a method for estimat...

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Main Authors: Justin R. Williams, Hyung-Woo Kim, Catherine M. Crespi
Format: Article
Language:English
Published: BMC 2020-06-01
Series:BMC Medical Research Methodology
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12874-020-01032-9
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spelling doaj-6ea213c6335a487ca9bc34516fc3c6602020-11-25T04:09:19ZengBMCBMC Medical Research Methodology1471-22882020-06-0120112510.1186/s12874-020-01032-9Modeling observations with a detection limit using a truncated normal distribution with censoringJustin R. Williams0Hyung-Woo Kim1Catherine M. Crespi2Department of Biostatistics, University of California Los AngelesApellis Pharmaceuticals, Inc.Department of Biostatistics, University of California Los AngelesAbstract Background When data are collected subject to a detection limit, observations below the detection limit may be considered censored. In addition, the domain of such observations may be restricted; for example, values may be required to be non-negative. Methods We propose a method for estimating population mean and variance from censored observations that accounts for known domain restriction. The method finds maximum likelihood estimates assuming an underlying truncated normal distribution. Results We show that our method, tcensReg, has lower bias, Type I error rates, and mean squared error than other methods commonly used for data with detection limits such as Tobit regression and single imputation under a range of simulation settings from mild to heavy censoring and truncation. We further demonstrate the consistency of the maximum likelihood estimators. We apply our method to analyze vision quality data collected from ophthalmology clinical trials comparing different types of intraocular lenses implanted during cataract surgery. All of the methods yield similar conclusions regarding non-inferiority, but estimates from the tcensReg method suggest that there may be greater mean differences and overall variability. Conclusions In the presence of detection limits, our new method tcensReg provides a way to incorporate known domain restrictions in dependent variables that substantially improves inferences.http://link.springer.com/article/10.1186/s12874-020-01032-9Contrast sensitivitylimited dependent variablesLimited domainVisual acuity
collection DOAJ
language English
format Article
sources DOAJ
author Justin R. Williams
Hyung-Woo Kim
Catherine M. Crespi
spellingShingle Justin R. Williams
Hyung-Woo Kim
Catherine M. Crespi
Modeling observations with a detection limit using a truncated normal distribution with censoring
BMC Medical Research Methodology
Contrast sensitivity
limited dependent variables
Limited domain
Visual acuity
author_facet Justin R. Williams
Hyung-Woo Kim
Catherine M. Crespi
author_sort Justin R. Williams
title Modeling observations with a detection limit using a truncated normal distribution with censoring
title_short Modeling observations with a detection limit using a truncated normal distribution with censoring
title_full Modeling observations with a detection limit using a truncated normal distribution with censoring
title_fullStr Modeling observations with a detection limit using a truncated normal distribution with censoring
title_full_unstemmed Modeling observations with a detection limit using a truncated normal distribution with censoring
title_sort modeling observations with a detection limit using a truncated normal distribution with censoring
publisher BMC
series BMC Medical Research Methodology
issn 1471-2288
publishDate 2020-06-01
description Abstract Background When data are collected subject to a detection limit, observations below the detection limit may be considered censored. In addition, the domain of such observations may be restricted; for example, values may be required to be non-negative. Methods We propose a method for estimating population mean and variance from censored observations that accounts for known domain restriction. The method finds maximum likelihood estimates assuming an underlying truncated normal distribution. Results We show that our method, tcensReg, has lower bias, Type I error rates, and mean squared error than other methods commonly used for data with detection limits such as Tobit regression and single imputation under a range of simulation settings from mild to heavy censoring and truncation. We further demonstrate the consistency of the maximum likelihood estimators. We apply our method to analyze vision quality data collected from ophthalmology clinical trials comparing different types of intraocular lenses implanted during cataract surgery. All of the methods yield similar conclusions regarding non-inferiority, but estimates from the tcensReg method suggest that there may be greater mean differences and overall variability. Conclusions In the presence of detection limits, our new method tcensReg provides a way to incorporate known domain restrictions in dependent variables that substantially improves inferences.
topic Contrast sensitivity
limited dependent variables
Limited domain
Visual acuity
url http://link.springer.com/article/10.1186/s12874-020-01032-9
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