Conformation dependent electronic transport in a DNA double-helix

We present a tight-binding study of conformation dependent electronic transport properties of DNA double-helix including its helical symmetry. We have studied the changes in the localization properties of DNA as we alter the number of stacked bases within every pitch of the double-helix keeping fixe...

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Main Authors: Sourav Kundu, S. N. Karmakar
Format: Article
Language:English
Published: AIP Publishing LLC 2015-10-01
Series:AIP Advances
Online Access:http://dx.doi.org/10.1063/1.4934507
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spelling doaj-6d2521c5a0394650a89ffdd4a288b3d22020-11-24T21:35:47ZengAIP Publishing LLCAIP Advances2158-32262015-10-01510107122107122-910.1063/1.4934507037510ADVConformation dependent electronic transport in a DNA double-helixSourav Kundu0S. N. Karmakar1Condensed Matter Physics Division, Saha Institute of Nuclear Physics, 1/AF, Bidhannagar, Kolkata 700 064, IndiaCondensed Matter Physics Division, Saha Institute of Nuclear Physics, 1/AF, Bidhannagar, Kolkata 700 064, IndiaWe present a tight-binding study of conformation dependent electronic transport properties of DNA double-helix including its helical symmetry. We have studied the changes in the localization properties of DNA as we alter the number of stacked bases within every pitch of the double-helix keeping fixed the total number of nitrogen bases within the DNA molecule. We take three DNA sequences, two of them are periodic and one is random and observe that in all the cases localization length increases as we increase the radius of DNA double-helix i.e., number of nucleobases within a pitch. We have also investigated the effect of backbone energetic on the I-V response of the system and found that in presence of helical symmetry, depending on the interplay of conformal variation and disorder, DNA can be found in either metallic, semiconducting and insulating phases, as observed experimentally.http://dx.doi.org/10.1063/1.4934507
collection DOAJ
language English
format Article
sources DOAJ
author Sourav Kundu
S. N. Karmakar
spellingShingle Sourav Kundu
S. N. Karmakar
Conformation dependent electronic transport in a DNA double-helix
AIP Advances
author_facet Sourav Kundu
S. N. Karmakar
author_sort Sourav Kundu
title Conformation dependent electronic transport in a DNA double-helix
title_short Conformation dependent electronic transport in a DNA double-helix
title_full Conformation dependent electronic transport in a DNA double-helix
title_fullStr Conformation dependent electronic transport in a DNA double-helix
title_full_unstemmed Conformation dependent electronic transport in a DNA double-helix
title_sort conformation dependent electronic transport in a dna double-helix
publisher AIP Publishing LLC
series AIP Advances
issn 2158-3226
publishDate 2015-10-01
description We present a tight-binding study of conformation dependent electronic transport properties of DNA double-helix including its helical symmetry. We have studied the changes in the localization properties of DNA as we alter the number of stacked bases within every pitch of the double-helix keeping fixed the total number of nitrogen bases within the DNA molecule. We take three DNA sequences, two of them are periodic and one is random and observe that in all the cases localization length increases as we increase the radius of DNA double-helix i.e., number of nucleobases within a pitch. We have also investigated the effect of backbone energetic on the I-V response of the system and found that in presence of helical symmetry, depending on the interplay of conformal variation and disorder, DNA can be found in either metallic, semiconducting and insulating phases, as observed experimentally.
url http://dx.doi.org/10.1063/1.4934507
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AT snkarmakar conformationdependentelectronictransportinadnadoublehelix
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