LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesothelioma
Abstract Background Malignant pleural mesothelioma (MPM) is a rare and aggressive cancer that develops in the pleural and outer layer of tissues surrounding the lungs. MPM is primarily caused by occupational exposure to asbestos and results in a poor prognosis. Effective therapeutics as well as earl...
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doaj-6b1815c412f64ae6920239311c3b9a402021-01-10T12:22:39ZengBMCBiomarker Research2050-77712020-01-01811710.1186/s40364-019-0180-0LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesotheliomaMin-Kyu Kim0Hyun-won Kim1Mirae Jang2Sung Soo Oh3Suk-Joong Yong4Yangsik Jeong5Soon-Hee Jung6Jong-Whan Choi7Departments of Biochemistry, Yonsei University Wonju College of MedicineDepartments of Biochemistry, Yonsei University Wonju College of MedicineDepartments of Pathology, Yonsei University Wonju College of MedicineDepartments of Preventive Medicine, Yonsei University Wonju College of MedicineDepartments of Internal Medicine, Yonsei University Wonju College of MedicineDepartments of Biochemistry, Yonsei University Wonju College of MedicineDepartments of Pathology, Yonsei University Wonju College of MedicineDepartments of Biochemistry, Yonsei University Wonju College of MedicineAbstract Background Malignant pleural mesothelioma (MPM) is a rare and aggressive cancer that develops in the pleural and outer layer of tissues surrounding the lungs. MPM is primarily caused by occupational exposure to asbestos and results in a poor prognosis. Effective therapeutics as well as early diagnostics for the MPM are still lacking. To identify potential diagnostic biomarkers for MPM, we performed bioinformatics analysis of public database. Methods Utilizing databases from Cancer Cell Line Encyclopedia (CCLE) and Gene Expression Omnibus (GEO), we identified several potential candidates that could act as MPM biomarkers. We carried out additional molecular analyses of these potential markers using MPM patient tissue samples via quantitative polymerase chain reaction. Results We identified Lysyl oxidase (LOX), Lysyl oxidase homologs 1&2 (LOXL1& LOXL2) Zinc Finger Protein, FOG Family Member 2 (ZFPM2) as potential diagnostic biomarkers for MPM. In this study, we found that the LOX family and ZFPM2 showed comparable diagnostic ability to Fibulin-3 or mesothelin (MSLN) and would be better potential biomarkers than Sulfatase 1 (SULF1), Thrombospondin 2 (THBS2) and Cadherin 11 (CDH11). Conclusions LOX family and ZPFM2 were identified as novel MPM diagnostic biomarkers which could strengthen MPM clinical diagnostic capabilities.https://doi.org/10.1186/s40364-019-0180-0LOXZFPM2Malignant pleural mesotheliomaDiagnostic biomarker |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Min-Kyu Kim Hyun-won Kim Mirae Jang Sung Soo Oh Suk-Joong Yong Yangsik Jeong Soon-Hee Jung Jong-Whan Choi |
spellingShingle |
Min-Kyu Kim Hyun-won Kim Mirae Jang Sung Soo Oh Suk-Joong Yong Yangsik Jeong Soon-Hee Jung Jong-Whan Choi LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesothelioma Biomarker Research LOX ZFPM2 Malignant pleural mesothelioma Diagnostic biomarker |
author_facet |
Min-Kyu Kim Hyun-won Kim Mirae Jang Sung Soo Oh Suk-Joong Yong Yangsik Jeong Soon-Hee Jung Jong-Whan Choi |
author_sort |
Min-Kyu Kim |
title |
LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesothelioma |
title_short |
LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesothelioma |
title_full |
LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesothelioma |
title_fullStr |
LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesothelioma |
title_full_unstemmed |
LOX family and ZFPM2 as novel diagnostic biomarkers for malignant pleural mesothelioma |
title_sort |
lox family and zfpm2 as novel diagnostic biomarkers for malignant pleural mesothelioma |
publisher |
BMC |
series |
Biomarker Research |
issn |
2050-7771 |
publishDate |
2020-01-01 |
description |
Abstract Background Malignant pleural mesothelioma (MPM) is a rare and aggressive cancer that develops in the pleural and outer layer of tissues surrounding the lungs. MPM is primarily caused by occupational exposure to asbestos and results in a poor prognosis. Effective therapeutics as well as early diagnostics for the MPM are still lacking. To identify potential diagnostic biomarkers for MPM, we performed bioinformatics analysis of public database. Methods Utilizing databases from Cancer Cell Line Encyclopedia (CCLE) and Gene Expression Omnibus (GEO), we identified several potential candidates that could act as MPM biomarkers. We carried out additional molecular analyses of these potential markers using MPM patient tissue samples via quantitative polymerase chain reaction. Results We identified Lysyl oxidase (LOX), Lysyl oxidase homologs 1&2 (LOXL1& LOXL2) Zinc Finger Protein, FOG Family Member 2 (ZFPM2) as potential diagnostic biomarkers for MPM. In this study, we found that the LOX family and ZFPM2 showed comparable diagnostic ability to Fibulin-3 or mesothelin (MSLN) and would be better potential biomarkers than Sulfatase 1 (SULF1), Thrombospondin 2 (THBS2) and Cadherin 11 (CDH11). Conclusions LOX family and ZPFM2 were identified as novel MPM diagnostic biomarkers which could strengthen MPM clinical diagnostic capabilities. |
topic |
LOX ZFPM2 Malignant pleural mesothelioma Diagnostic biomarker |
url |
https://doi.org/10.1186/s40364-019-0180-0 |
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