Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR Spectroscopy
Attenuated total reflection–Fourier transform infrared (ATR–FTIR) spectroscopy is a simple, cheap, and fast method to collect chemical compositional information from microalgae. However, (semi)quantitative evaluation of the collected data can be daunting. In this work, ATR–FTIR spectroscopy was used...
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doaj-6af6ab8c55004684899be27a374a150b2020-11-25T01:23:30ZengMDPI AGMolecules1420-30492019-09-012418323710.3390/molecules24183237molecules24183237Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR SpectroscopyLorenza Ferro0Zivan Gojkovic1András Gorzsás2Christiane Funk3Department of Chemistry, Umeå University, 901 87 Umeå, SwedenDepartment of Chemistry, Umeå University, 901 87 Umeå, SwedenDepartment of Chemistry, Umeå University, 901 87 Umeå, SwedenDepartment of Chemistry, Umeå University, 901 87 Umeå, SwedenAttenuated total reflection–Fourier transform infrared (ATR–FTIR) spectroscopy is a simple, cheap, and fast method to collect chemical compositional information from microalgae. However, (semi)quantitative evaluation of the collected data can be daunting. In this work, ATR–FTIR spectroscopy was used to monitor changes of protein, lipid, and carbohydrate content in seven green microalgae grown under nitrogen starvation. Three statistical methods—univariate linear regression analysis (ULRA), orthogonal partial least squares (OPLS), and multivariate curve resolution-alternating least squares (MCR–ALS)—were compared in their ability to model and predict the concentration of these compounds in the biomass. OPLS was found superior, since it i) included all three compounds simultaneously; ii) explained variations in the data very well; iii) had excellent prediction accuracy for proteins and lipids, and acceptable for carbohydrates; and iv) was able to discriminate samples based on cultivation stage and type of storage compounds accumulated in the cells. ULRA models worked well for the determination of proteins and lipids, but carbohydrates could only be estimated if already determined protein contents were used for scaling. Results obtained by MCR–ALS were similar to ULRA, however, this method is considerably easier to perform and interpret than the more abstract statistical/chemometric methods. FTIR-spectroscopy-based models allow high-throughput, cost-effective, and rapid estimation of biomass composition of green microalgae.https://www.mdpi.com/1420-3049/24/18/3237microalgaeFTIR spectroscopystatistical methodscarbohydrateslipidsproteinsnitrogen starvation |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Lorenza Ferro Zivan Gojkovic András Gorzsás Christiane Funk |
spellingShingle |
Lorenza Ferro Zivan Gojkovic András Gorzsás Christiane Funk Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR Spectroscopy Molecules microalgae FTIR spectroscopy statistical methods carbohydrates lipids proteins nitrogen starvation |
author_facet |
Lorenza Ferro Zivan Gojkovic András Gorzsás Christiane Funk |
author_sort |
Lorenza Ferro |
title |
Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR Spectroscopy |
title_short |
Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR Spectroscopy |
title_full |
Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR Spectroscopy |
title_fullStr |
Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR Spectroscopy |
title_full_unstemmed |
Statistical Methods for Rapid Quantification of Proteins, Lipids, and Carbohydrates in Nordic Microalgal Species Using ATR–FTIR Spectroscopy |
title_sort |
statistical methods for rapid quantification of proteins, lipids, and carbohydrates in nordic microalgal species using atr–ftir spectroscopy |
publisher |
MDPI AG |
series |
Molecules |
issn |
1420-3049 |
publishDate |
2019-09-01 |
description |
Attenuated total reflection–Fourier transform infrared (ATR–FTIR) spectroscopy is a simple, cheap, and fast method to collect chemical compositional information from microalgae. However, (semi)quantitative evaluation of the collected data can be daunting. In this work, ATR–FTIR spectroscopy was used to monitor changes of protein, lipid, and carbohydrate content in seven green microalgae grown under nitrogen starvation. Three statistical methods—univariate linear regression analysis (ULRA), orthogonal partial least squares (OPLS), and multivariate curve resolution-alternating least squares (MCR–ALS)—were compared in their ability to model and predict the concentration of these compounds in the biomass. OPLS was found superior, since it i) included all three compounds simultaneously; ii) explained variations in the data very well; iii) had excellent prediction accuracy for proteins and lipids, and acceptable for carbohydrates; and iv) was able to discriminate samples based on cultivation stage and type of storage compounds accumulated in the cells. ULRA models worked well for the determination of proteins and lipids, but carbohydrates could only be estimated if already determined protein contents were used for scaling. Results obtained by MCR–ALS were similar to ULRA, however, this method is considerably easier to perform and interpret than the more abstract statistical/chemometric methods. FTIR-spectroscopy-based models allow high-throughput, cost-effective, and rapid estimation of biomass composition of green microalgae. |
topic |
microalgae FTIR spectroscopy statistical methods carbohydrates lipids proteins nitrogen starvation |
url |
https://www.mdpi.com/1420-3049/24/18/3237 |
work_keys_str_mv |
AT lorenzaferro statisticalmethodsforrapidquantificationofproteinslipidsandcarbohydratesinnordicmicroalgalspeciesusingatrftirspectroscopy AT zivangojkovic statisticalmethodsforrapidquantificationofproteinslipidsandcarbohydratesinnordicmicroalgalspeciesusingatrftirspectroscopy AT andrasgorzsas statisticalmethodsforrapidquantificationofproteinslipidsandcarbohydratesinnordicmicroalgalspeciesusingatrftirspectroscopy AT christianefunk statisticalmethodsforrapidquantificationofproteinslipidsandcarbohydratesinnordicmicroalgalspeciesusingatrftirspectroscopy |
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