Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+)
Abstract Heavy metal Cadmium (Cd2+) pollution has become a severe environmental problem for aquatic organisms. In crustaceans, gills (Gi) and hepatopancreas (Hp) play a vital role in the toxicology. However, in Macrobrachium rosenbergill, there are few researches about gill and hepatopancreases resp...
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2021-08-01
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doaj-6ad67e7fa7604445a9b30a7627d91f262021-08-15T11:24:04ZengNature Publishing GroupScientific Reports2045-23222021-08-0111111110.1038/s41598-021-95709-wComparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+)Xue Liu0Hucheng Jiang1Baoqing Ye2Hongli Qian3Ziqi Guo4Haotian Bai5Jinhua Gong6Jianbin Feng7Keyi Ma8Key Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture (Shanghai Ocean University), College of Fisheries and Life Science, Shanghai Collaborative Innovation for Aquatic Animal Genetics and Breeding, Shanghai Ocean UniversityFreshwater Fisheries Research Institute of Jiangsu ProvinceTemasek Life Sciences LaboratoryKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture (Shanghai Ocean University), College of Fisheries and Life Science, Shanghai Collaborative Innovation for Aquatic Animal Genetics and Breeding, Shanghai Ocean UniversityKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture (Shanghai Ocean University), College of Fisheries and Life Science, Shanghai Collaborative Innovation for Aquatic Animal Genetics and Breeding, Shanghai Ocean UniversityKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture (Shanghai Ocean University), College of Fisheries and Life Science, Shanghai Collaborative Innovation for Aquatic Animal Genetics and Breeding, Shanghai Ocean UniversityDinghe Aquatic Science and Technology Development Co., LTDKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture (Shanghai Ocean University), College of Fisheries and Life Science, Shanghai Collaborative Innovation for Aquatic Animal Genetics and Breeding, Shanghai Ocean UniversityKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture (Shanghai Ocean University), College of Fisheries and Life Science, Shanghai Collaborative Innovation for Aquatic Animal Genetics and Breeding, Shanghai Ocean UniversityAbstract Heavy metal Cadmium (Cd2+) pollution has become a severe environmental problem for aquatic organisms. In crustaceans, gills (Gi) and hepatopancreas (Hp) play a vital role in the toxicology. However, in Macrobrachium rosenbergill, there are few researches about gill and hepatopancreases responding to Cd2+ stress at a molecular level. In this study, transcriptomic analysis was applied to characterize gene expression profiles of gills and hepatopancreas of M. rosenbergill after Cd2+ exposure for 0 h, 3 h and 3 d. Six cDNA libraries (Gi 0 h, Gi 3 h, Gi 3 d, Hp 0 h, Hp 3 h, and Hp 3 d) were constructed and a total of 66,676 transcripts and 48,991 unigenes were annotated. Furthermore, differentially expressed genes (DEGs) were isolated by comparing the Cd2+ treated time-point libraries (3 h and 3 d group) with the control library (0 h group). The results showed that most of the DEGs were down-regulated after Cd2+ exposure and the number of DEGs among gill groups were significantly higher than those among hepatopancreas groups. GO functional and KEGG pathway analysis suggested many key DEGs in response to the Cd2+ stress, such as metallothionein and Hemocyanin. Additionally, a total of six DEGs were randomly selected to further identify their expressional profile by qPCR. The results indicated that these DEGs were involved in the response to Cd2+. This comparative transcriptome provides valuable molecular information on the mechanisms of responding to Cd2+ stress in M. rosenbergii, which lays the foundation for further understanding of heavy metal stress.https://doi.org/10.1038/s41598-021-95709-w |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Xue Liu Hucheng Jiang Baoqing Ye Hongli Qian Ziqi Guo Haotian Bai Jinhua Gong Jianbin Feng Keyi Ma |
spellingShingle |
Xue Liu Hucheng Jiang Baoqing Ye Hongli Qian Ziqi Guo Haotian Bai Jinhua Gong Jianbin Feng Keyi Ma Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+) Scientific Reports |
author_facet |
Xue Liu Hucheng Jiang Baoqing Ye Hongli Qian Ziqi Guo Haotian Bai Jinhua Gong Jianbin Feng Keyi Ma |
author_sort |
Xue Liu |
title |
Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+) |
title_short |
Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+) |
title_full |
Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+) |
title_fullStr |
Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+) |
title_full_unstemmed |
Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+) |
title_sort |
comparative transcriptome analysis of the gills and hepatopancreas from macrobrachium rosenbergii exposed to the heavy metal cadmium (cd2+) |
publisher |
Nature Publishing Group |
series |
Scientific Reports |
issn |
2045-2322 |
publishDate |
2021-08-01 |
description |
Abstract Heavy metal Cadmium (Cd2+) pollution has become a severe environmental problem for aquatic organisms. In crustaceans, gills (Gi) and hepatopancreas (Hp) play a vital role in the toxicology. However, in Macrobrachium rosenbergill, there are few researches about gill and hepatopancreases responding to Cd2+ stress at a molecular level. In this study, transcriptomic analysis was applied to characterize gene expression profiles of gills and hepatopancreas of M. rosenbergill after Cd2+ exposure for 0 h, 3 h and 3 d. Six cDNA libraries (Gi 0 h, Gi 3 h, Gi 3 d, Hp 0 h, Hp 3 h, and Hp 3 d) were constructed and a total of 66,676 transcripts and 48,991 unigenes were annotated. Furthermore, differentially expressed genes (DEGs) were isolated by comparing the Cd2+ treated time-point libraries (3 h and 3 d group) with the control library (0 h group). The results showed that most of the DEGs were down-regulated after Cd2+ exposure and the number of DEGs among gill groups were significantly higher than those among hepatopancreas groups. GO functional and KEGG pathway analysis suggested many key DEGs in response to the Cd2+ stress, such as metallothionein and Hemocyanin. Additionally, a total of six DEGs were randomly selected to further identify their expressional profile by qPCR. The results indicated that these DEGs were involved in the response to Cd2+. This comparative transcriptome provides valuable molecular information on the mechanisms of responding to Cd2+ stress in M. rosenbergii, which lays the foundation for further understanding of heavy metal stress. |
url |
https://doi.org/10.1038/s41598-021-95709-w |
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