Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes

Abstract Hyperspectral data encode information from electromagnetic radiation (i.e., color) of any object in the form of a spectral signature; these data can then be used to distinguish among materials or even map whole landscapes. Although hyperspectral data have been mostly used to study landscape...

Full description

Bibliographic Details
Main Authors: M. A. Kolmann, M. Kalacska, O. Lucanus, L. Sousa, D. Wainwright, J. P. Arroyo-Mora, M. C. Andrade
Format: Article
Language:English
Published: Nature Publishing Group 2021-08-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-95713-0
id doaj-6ac15654cdfa4867b964580a31a7432c
record_format Article
spelling doaj-6ac15654cdfa4867b964580a31a7432c2021-08-15T11:25:30ZengNature Publishing GroupScientific Reports2045-23222021-08-0111111510.1038/s41598-021-95713-0Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishesM. A. Kolmann0M. Kalacska1O. Lucanus2L. Sousa3D. Wainwright4J. P. Arroyo-Mora5M. C. Andrade6University of Michigan, Museum of PaleontologyApplied Remote Sensing Lab, McGill UniversityBelow Water Inc.Laboratório de Ictiologia de Altamira, Universidade Federal do ParáYale University (Peabody Museum)National Research Council CanadaNúcleo de Ecologia Aquática e Pesca da Amazônia, Universidade Federal do ParáAbstract Hyperspectral data encode information from electromagnetic radiation (i.e., color) of any object in the form of a spectral signature; these data can then be used to distinguish among materials or even map whole landscapes. Although hyperspectral data have been mostly used to study landscape ecology, floral diversity and many other applications in the natural sciences, we propose that spectral signatures can be used for rapid assessment of faunal biodiversity, akin to DNA barcoding and metabarcoding. We demonstrate that spectral signatures of individual, live fish specimens can accurately capture species and clade-level differences in fish coloration, specifically among piranhas and pacus (Family Serrasalmidae), fishes with a long history of taxonomic confusion. We analyzed 47 serrasalmid species and could distinguish spectra among different species and clades, with the method sensitive enough to document changes in fish coloration over ontogeny. Herbivorous pacu spectra were more like one another than they were to piranhas; however, our method also documented interspecific variation in pacus that corresponds to cryptic lineages. While spectra do not serve as an alternative to the collection of curated specimens, hyperspectral data of fishes in the field should help clarify which specimens might be unique or undescribed, complementing existing molecular and morphological techniques.https://doi.org/10.1038/s41598-021-95713-0
collection DOAJ
language English
format Article
sources DOAJ
author M. A. Kolmann
M. Kalacska
O. Lucanus
L. Sousa
D. Wainwright
J. P. Arroyo-Mora
M. C. Andrade
spellingShingle M. A. Kolmann
M. Kalacska
O. Lucanus
L. Sousa
D. Wainwright
J. P. Arroyo-Mora
M. C. Andrade
Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes
Scientific Reports
author_facet M. A. Kolmann
M. Kalacska
O. Lucanus
L. Sousa
D. Wainwright
J. P. Arroyo-Mora
M. C. Andrade
author_sort M. A. Kolmann
title Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes
title_short Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes
title_full Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes
title_fullStr Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes
title_full_unstemmed Hyperspectral data as a biodiversity screening tool can differentiate among diverse Neotropical fishes
title_sort hyperspectral data as a biodiversity screening tool can differentiate among diverse neotropical fishes
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-08-01
description Abstract Hyperspectral data encode information from electromagnetic radiation (i.e., color) of any object in the form of a spectral signature; these data can then be used to distinguish among materials or even map whole landscapes. Although hyperspectral data have been mostly used to study landscape ecology, floral diversity and many other applications in the natural sciences, we propose that spectral signatures can be used for rapid assessment of faunal biodiversity, akin to DNA barcoding and metabarcoding. We demonstrate that spectral signatures of individual, live fish specimens can accurately capture species and clade-level differences in fish coloration, specifically among piranhas and pacus (Family Serrasalmidae), fishes with a long history of taxonomic confusion. We analyzed 47 serrasalmid species and could distinguish spectra among different species and clades, with the method sensitive enough to document changes in fish coloration over ontogeny. Herbivorous pacu spectra were more like one another than they were to piranhas; however, our method also documented interspecific variation in pacus that corresponds to cryptic lineages. While spectra do not serve as an alternative to the collection of curated specimens, hyperspectral data of fishes in the field should help clarify which specimens might be unique or undescribed, complementing existing molecular and morphological techniques.
url https://doi.org/10.1038/s41598-021-95713-0
work_keys_str_mv AT makolmann hyperspectraldataasabiodiversityscreeningtoolcandifferentiateamongdiverseneotropicalfishes
AT mkalacska hyperspectraldataasabiodiversityscreeningtoolcandifferentiateamongdiverseneotropicalfishes
AT olucanus hyperspectraldataasabiodiversityscreeningtoolcandifferentiateamongdiverseneotropicalfishes
AT lsousa hyperspectraldataasabiodiversityscreeningtoolcandifferentiateamongdiverseneotropicalfishes
AT dwainwright hyperspectraldataasabiodiversityscreeningtoolcandifferentiateamongdiverseneotropicalfishes
AT jparroyomora hyperspectraldataasabiodiversityscreeningtoolcandifferentiateamongdiverseneotropicalfishes
AT mcandrade hyperspectraldataasabiodiversityscreeningtoolcandifferentiateamongdiverseneotropicalfishes
_version_ 1721206864967892992