There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)

Abstract Background Idiopathic pulmonary fibrosis (IPF) is a chronic interstitial lung disease characterized by fibrosis and progressive loss of lung function. The pathophysiological pathways involved in IPF are not well understood. Abnormal lipid metabolism has been described in various other chron...

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Main Authors: Shabarinath Nambiar, Britt Clynick, Bong S. How, Adam King, E. Haydn Walters, Nicole S. Goh, Tamera J. Corte, Robert Trengove, Dino Tan, Yuben Moodley
Format: Article
Language:English
Published: BMC 2021-04-01
Series:Respiratory Research
Subjects:
IPF
MS
DIA
Online Access:https://doi.org/10.1186/s12931-021-01682-3
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spelling doaj-6aafe39249ff477eafc61d5b29cd538c2021-04-11T11:15:48ZengBMCRespiratory Research1465-993X2021-04-012211810.1186/s12931-021-01682-3There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)Shabarinath Nambiar0Britt Clynick1Bong S. How2Adam King3E. Haydn Walters4Nicole S. Goh5Tamera J. Corte6Robert Trengove7Dino Tan8Yuben Moodley9Separation Science and Metabolomics Laboratory, Murdoch UniversitySchool of Biomedical Science, University of Western AustraliaSeparation Science and Metabolomics Laboratory, Murdoch UniversityScientific Operations, Waters CorporationAlfred HospitalAustin HospitalUniversity of SydneySeparation Science and Metabolomics Laboratory, Murdoch UniversitySchool of Biomedical Science, University of Western AustraliaSchool of Biomedical Science, University of Western AustraliaAbstract Background Idiopathic pulmonary fibrosis (IPF) is a chronic interstitial lung disease characterized by fibrosis and progressive loss of lung function. The pathophysiological pathways involved in IPF are not well understood. Abnormal lipid metabolism has been described in various other chronic lung diseases including asthma and chronic obstructive pulmonary disease (COPD). However, its potential role in IPF pathogenesis remains unclear. Methods In this study, we used ultra-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) to characterize lipid changes in plasma derived from IPF patients with stable and progressive disease. We further applied a data-independent acquisition (DIA) technique called SONAR, to improve the specificity of lipid identification. Results Statistical modelling showed variable discrimination between the stable and progressive subjects, revealing differences in the detection of triglycerides (TG) and phosphatidylcholines (PC) between progressors and stable IPF groups, which was further confirmed by mass spectrometry imaging (MSI) in IPF tissue. Conclusion This is the first study to characterise lipid metabolism between stable and progressive IPF, with results suggesting disparities in the circulating lipidome with disease progression.https://doi.org/10.1186/s12931-021-01682-3LipidsPlasmaIPFMSDIASONAR
collection DOAJ
language English
format Article
sources DOAJ
author Shabarinath Nambiar
Britt Clynick
Bong S. How
Adam King
E. Haydn Walters
Nicole S. Goh
Tamera J. Corte
Robert Trengove
Dino Tan
Yuben Moodley
spellingShingle Shabarinath Nambiar
Britt Clynick
Bong S. How
Adam King
E. Haydn Walters
Nicole S. Goh
Tamera J. Corte
Robert Trengove
Dino Tan
Yuben Moodley
There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)
Respiratory Research
Lipids
Plasma
IPF
MS
DIA
SONAR
author_facet Shabarinath Nambiar
Britt Clynick
Bong S. How
Adam King
E. Haydn Walters
Nicole S. Goh
Tamera J. Corte
Robert Trengove
Dino Tan
Yuben Moodley
author_sort Shabarinath Nambiar
title There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)
title_short There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)
title_full There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)
title_fullStr There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)
title_full_unstemmed There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)
title_sort there is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (ipf)
publisher BMC
series Respiratory Research
issn 1465-993X
publishDate 2021-04-01
description Abstract Background Idiopathic pulmonary fibrosis (IPF) is a chronic interstitial lung disease characterized by fibrosis and progressive loss of lung function. The pathophysiological pathways involved in IPF are not well understood. Abnormal lipid metabolism has been described in various other chronic lung diseases including asthma and chronic obstructive pulmonary disease (COPD). However, its potential role in IPF pathogenesis remains unclear. Methods In this study, we used ultra-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) to characterize lipid changes in plasma derived from IPF patients with stable and progressive disease. We further applied a data-independent acquisition (DIA) technique called SONAR, to improve the specificity of lipid identification. Results Statistical modelling showed variable discrimination between the stable and progressive subjects, revealing differences in the detection of triglycerides (TG) and phosphatidylcholines (PC) between progressors and stable IPF groups, which was further confirmed by mass spectrometry imaging (MSI) in IPF tissue. Conclusion This is the first study to characterise lipid metabolism between stable and progressive IPF, with results suggesting disparities in the circulating lipidome with disease progression.
topic Lipids
Plasma
IPF
MS
DIA
SONAR
url https://doi.org/10.1186/s12931-021-01682-3
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