There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)
Abstract Background Idiopathic pulmonary fibrosis (IPF) is a chronic interstitial lung disease characterized by fibrosis and progressive loss of lung function. The pathophysiological pathways involved in IPF are not well understood. Abnormal lipid metabolism has been described in various other chron...
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doaj-6aafe39249ff477eafc61d5b29cd538c2021-04-11T11:15:48ZengBMCRespiratory Research1465-993X2021-04-012211810.1186/s12931-021-01682-3There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF)Shabarinath Nambiar0Britt Clynick1Bong S. How2Adam King3E. Haydn Walters4Nicole S. Goh5Tamera J. Corte6Robert Trengove7Dino Tan8Yuben Moodley9Separation Science and Metabolomics Laboratory, Murdoch UniversitySchool of Biomedical Science, University of Western AustraliaSeparation Science and Metabolomics Laboratory, Murdoch UniversityScientific Operations, Waters CorporationAlfred HospitalAustin HospitalUniversity of SydneySeparation Science and Metabolomics Laboratory, Murdoch UniversitySchool of Biomedical Science, University of Western AustraliaSchool of Biomedical Science, University of Western AustraliaAbstract Background Idiopathic pulmonary fibrosis (IPF) is a chronic interstitial lung disease characterized by fibrosis and progressive loss of lung function. The pathophysiological pathways involved in IPF are not well understood. Abnormal lipid metabolism has been described in various other chronic lung diseases including asthma and chronic obstructive pulmonary disease (COPD). However, its potential role in IPF pathogenesis remains unclear. Methods In this study, we used ultra-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) to characterize lipid changes in plasma derived from IPF patients with stable and progressive disease. We further applied a data-independent acquisition (DIA) technique called SONAR, to improve the specificity of lipid identification. Results Statistical modelling showed variable discrimination between the stable and progressive subjects, revealing differences in the detection of triglycerides (TG) and phosphatidylcholines (PC) between progressors and stable IPF groups, which was further confirmed by mass spectrometry imaging (MSI) in IPF tissue. Conclusion This is the first study to characterise lipid metabolism between stable and progressive IPF, with results suggesting disparities in the circulating lipidome with disease progression.https://doi.org/10.1186/s12931-021-01682-3LipidsPlasmaIPFMSDIASONAR |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Shabarinath Nambiar Britt Clynick Bong S. How Adam King E. Haydn Walters Nicole S. Goh Tamera J. Corte Robert Trengove Dino Tan Yuben Moodley |
spellingShingle |
Shabarinath Nambiar Britt Clynick Bong S. How Adam King E. Haydn Walters Nicole S. Goh Tamera J. Corte Robert Trengove Dino Tan Yuben Moodley There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF) Respiratory Research Lipids Plasma IPF MS DIA SONAR |
author_facet |
Shabarinath Nambiar Britt Clynick Bong S. How Adam King E. Haydn Walters Nicole S. Goh Tamera J. Corte Robert Trengove Dino Tan Yuben Moodley |
author_sort |
Shabarinath Nambiar |
title |
There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF) |
title_short |
There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF) |
title_full |
There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF) |
title_fullStr |
There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF) |
title_full_unstemmed |
There is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (IPF) |
title_sort |
there is detectable variation in the lipidomic profile between stable and progressive patients with idiopathic pulmonary fibrosis (ipf) |
publisher |
BMC |
series |
Respiratory Research |
issn |
1465-993X |
publishDate |
2021-04-01 |
description |
Abstract Background Idiopathic pulmonary fibrosis (IPF) is a chronic interstitial lung disease characterized by fibrosis and progressive loss of lung function. The pathophysiological pathways involved in IPF are not well understood. Abnormal lipid metabolism has been described in various other chronic lung diseases including asthma and chronic obstructive pulmonary disease (COPD). However, its potential role in IPF pathogenesis remains unclear. Methods In this study, we used ultra-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) to characterize lipid changes in plasma derived from IPF patients with stable and progressive disease. We further applied a data-independent acquisition (DIA) technique called SONAR, to improve the specificity of lipid identification. Results Statistical modelling showed variable discrimination between the stable and progressive subjects, revealing differences in the detection of triglycerides (TG) and phosphatidylcholines (PC) between progressors and stable IPF groups, which was further confirmed by mass spectrometry imaging (MSI) in IPF tissue. Conclusion This is the first study to characterise lipid metabolism between stable and progressive IPF, with results suggesting disparities in the circulating lipidome with disease progression. |
topic |
Lipids Plasma IPF MS DIA SONAR |
url |
https://doi.org/10.1186/s12931-021-01682-3 |
work_keys_str_mv |
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