Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.

Hepatitis is a general term meaning inflammation of the liver, which can be caused by a variety of viruses. However, a substantial number of cases remain with unknown aetiology. We analysed the serum of patients with clinical signs of hepatitis using a metagenomics approach to characterize their vir...

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Main Authors: Eloy Gonzales-Gustavson, N Timoneda, X Fernandez-Cassi, A Caballero, J F Abril, M Buti, F Rodriguez-Frias, R Girones
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2017-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5628893?pdf=render
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spelling doaj-6a58f23b3f674c8e902067d20199e0b82020-11-25T01:36:30ZengPublic Library of Science (PLoS)PLoS ONE1932-62032017-01-011210e018591110.1371/journal.pone.0185911Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.Eloy Gonzales-GustavsonN TimonedaX Fernandez-CassiA CaballeroJ F AbrilM ButiF Rodriguez-FriasR GironesHepatitis is a general term meaning inflammation of the liver, which can be caused by a variety of viruses. However, a substantial number of cases remain with unknown aetiology. We analysed the serum of patients with clinical signs of hepatitis using a metagenomics approach to characterize their viral species composition. Four pools of patients with hepatitis without identified aetiological agents were evaluated. Additionally, one pool of patients with hepatitis E (HEV) and pools of healthy volunteers were included as controls. A high diversity of anelloviruses, including novel sequences, was found in pools from patients with hepatitis of unknown aetiology. Moreover, viruses recently associated with gastroenteritis as sapovirus GV.2 and astrovirus VA3 were also detected only in those pools. Besides, most of the HEV genome was recovered from the HEV pool. Finally, GB virus C and human endogenous retrovirus were found in the HEV and healthy pools. Our study provides an overview of the virome in serum from hepatitis patients suggesting a potential role of these viruses not previously described in cases of hepatitis. However, further epidemiologic studies are necessary to confirm their contribution to the development of hepatitis.http://europepmc.org/articles/PMC5628893?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Eloy Gonzales-Gustavson
N Timoneda
X Fernandez-Cassi
A Caballero
J F Abril
M Buti
F Rodriguez-Frias
R Girones
spellingShingle Eloy Gonzales-Gustavson
N Timoneda
X Fernandez-Cassi
A Caballero
J F Abril
M Buti
F Rodriguez-Frias
R Girones
Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.
PLoS ONE
author_facet Eloy Gonzales-Gustavson
N Timoneda
X Fernandez-Cassi
A Caballero
J F Abril
M Buti
F Rodriguez-Frias
R Girones
author_sort Eloy Gonzales-Gustavson
title Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.
title_short Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.
title_full Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.
title_fullStr Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.
title_full_unstemmed Identification of sapovirus GV.2, astrovirus VA3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.
title_sort identification of sapovirus gv.2, astrovirus va3 and novel anelloviruses in serum from patients with acute hepatitis of unknown aetiology.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2017-01-01
description Hepatitis is a general term meaning inflammation of the liver, which can be caused by a variety of viruses. However, a substantial number of cases remain with unknown aetiology. We analysed the serum of patients with clinical signs of hepatitis using a metagenomics approach to characterize their viral species composition. Four pools of patients with hepatitis without identified aetiological agents were evaluated. Additionally, one pool of patients with hepatitis E (HEV) and pools of healthy volunteers were included as controls. A high diversity of anelloviruses, including novel sequences, was found in pools from patients with hepatitis of unknown aetiology. Moreover, viruses recently associated with gastroenteritis as sapovirus GV.2 and astrovirus VA3 were also detected only in those pools. Besides, most of the HEV genome was recovered from the HEV pool. Finally, GB virus C and human endogenous retrovirus were found in the HEV and healthy pools. Our study provides an overview of the virome in serum from hepatitis patients suggesting a potential role of these viruses not previously described in cases of hepatitis. However, further epidemiologic studies are necessary to confirm their contribution to the development of hepatitis.
url http://europepmc.org/articles/PMC5628893?pdf=render
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