Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata

Abstract Invasiveness and the impacts of introduced plants are known to be mediated by plant-microbe interactions. Yet, the microbial communities associated with invasive plants are generally poorly understood. Here we report on the first comprehensive investigation of the bacterial and fungal commu...

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Main Authors: Casper N. Kamutando, Surendra Vikram, Gilbert Kamgan-Nkuekam, Thulani P. Makhalanyane, Michelle Greve, Johannes J. Le Roux, David M. Richardson, Don Cowan, Angel Valverde
Format: Article
Language:English
Published: Nature Publishing Group 2017-07-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-017-07018-w
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spelling doaj-69abe66835b94476b03540b9165a07552020-12-08T00:06:37ZengNature Publishing GroupScientific Reports2045-23222017-07-01711910.1038/s41598-017-07018-wSoil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbataCasper N. Kamutando0Surendra Vikram1Gilbert Kamgan-Nkuekam2Thulani P. Makhalanyane3Michelle Greve4Johannes J. Le Roux5David M. Richardson6Don Cowan7Angel Valverde8Centre for Microbial Ecology and Genomics, Department of Genetics, University of PretoriaCentre for Microbial Ecology and Genomics, Department of Genetics, University of PretoriaCentre for Microbial Ecology and Genomics, Department of Genetics, University of PretoriaCentre for Microbial Ecology and Genomics, Department of Genetics, University of PretoriaDepartment of Plant and Soil Sciences, University of PretoriaCentre for Invasion Biology, Department of Botany & Zoology, Stellenbosch UniversityCentre for Invasion Biology, Department of Botany & Zoology, Stellenbosch UniversityCentre for Microbial Ecology and Genomics, Department of Genetics, University of PretoriaCentre for Microbial Ecology and Genomics, Department of Genetics, University of PretoriaAbstract Invasiveness and the impacts of introduced plants are known to be mediated by plant-microbe interactions. Yet, the microbial communities associated with invasive plants are generally poorly understood. Here we report on the first comprehensive investigation of the bacterial and fungal communities inhabiting the rhizosphere and the surrounding bulk soil of a widespread invasive tree, Acacia dealbata. Amplicon sequencing data indicated that rhizospheric microbial communities differed significantly in structure and composition from those of the bulk soil. Two bacterial (Alphaproteobacteria and Gammaproteobacteria) and two fungal (Pezizomycetes and Agaricomycetes) classes were enriched in the rhizosphere compared with bulk soils. Changes in nutritional status, possibly induced by A. dealbata, primarily shaped rhizosphere soil communities. Despite a high degree of geographic variability in the diversity and composition of microbial communities, invasive A. dealbata populations shared a core of bacterial and fungal taxa, some of which are known to be involved in N and P cycling, while others are regarded as plant pathogens. Shotgun metagenomic analysis also showed that several functional genes related to plant growth promotion were overrepresented in the rhizospheres of A. dealbata. Overall, results suggest that rhizosphere microbes may contribute to the widespread success of this invader in novel environments.https://doi.org/10.1038/s41598-017-07018-w
collection DOAJ
language English
format Article
sources DOAJ
author Casper N. Kamutando
Surendra Vikram
Gilbert Kamgan-Nkuekam
Thulani P. Makhalanyane
Michelle Greve
Johannes J. Le Roux
David M. Richardson
Don Cowan
Angel Valverde
spellingShingle Casper N. Kamutando
Surendra Vikram
Gilbert Kamgan-Nkuekam
Thulani P. Makhalanyane
Michelle Greve
Johannes J. Le Roux
David M. Richardson
Don Cowan
Angel Valverde
Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata
Scientific Reports
author_facet Casper N. Kamutando
Surendra Vikram
Gilbert Kamgan-Nkuekam
Thulani P. Makhalanyane
Michelle Greve
Johannes J. Le Roux
David M. Richardson
Don Cowan
Angel Valverde
author_sort Casper N. Kamutando
title Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata
title_short Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata
title_full Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata
title_fullStr Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata
title_full_unstemmed Soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree Acacia dealbata
title_sort soil nutritional status and biogeography influence rhizosphere microbial communities associated with the invasive tree acacia dealbata
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2017-07-01
description Abstract Invasiveness and the impacts of introduced plants are known to be mediated by plant-microbe interactions. Yet, the microbial communities associated with invasive plants are generally poorly understood. Here we report on the first comprehensive investigation of the bacterial and fungal communities inhabiting the rhizosphere and the surrounding bulk soil of a widespread invasive tree, Acacia dealbata. Amplicon sequencing data indicated that rhizospheric microbial communities differed significantly in structure and composition from those of the bulk soil. Two bacterial (Alphaproteobacteria and Gammaproteobacteria) and two fungal (Pezizomycetes and Agaricomycetes) classes were enriched in the rhizosphere compared with bulk soils. Changes in nutritional status, possibly induced by A. dealbata, primarily shaped rhizosphere soil communities. Despite a high degree of geographic variability in the diversity and composition of microbial communities, invasive A. dealbata populations shared a core of bacterial and fungal taxa, some of which are known to be involved in N and P cycling, while others are regarded as plant pathogens. Shotgun metagenomic analysis also showed that several functional genes related to plant growth promotion were overrepresented in the rhizospheres of A. dealbata. Overall, results suggest that rhizosphere microbes may contribute to the widespread success of this invader in novel environments.
url https://doi.org/10.1038/s41598-017-07018-w
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