Low coverage sequencing for repetitive DNA analysis in Passiflora edulis Sims: citogenomic characterization of transposable elements and satellite DNA

Low coverage sequencing for repetitive DNA analysis in Passiflora edulis Sims: citogenomic characterization of transposable elements and satellite DNA

Abstract Background The cytogenomic study of repetitive regions is fundamental for the understanding of morphofunctional mechanisms and genome evolution. Passiflora edulis a species of relevant agronomic value, this work had its genome sequenced by next generation sequencing and bioinformatics analy...

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Bibliographic Details
Main Authors: Vanessa Carvalho Cayres Pamponét, Margarete Magalhães Souza, Gonçalo Santos Silva, Fabienne Micheli, Cláusio Antônio Ferreira de Melo, Sarah Gomes de Oliveira, Eduardo Almeida Costa, Ronan Xavier Corrêa
Format: Article
Language:English
Published: BMC 2019-04-01
Series:BMC Genomics
Subjects:
Chromosome mapping
LTR retrotransposons
RepeatExplorer
in tandem repetitive DNA
Molecular cytogenetics
FISH
Online Access:http://link.springer.com/article/10.1186/s12864-019-5576-6

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http://link.springer.com/article/10.1186/s12864-019-5576-6

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