<i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading Archaeon

A novel hyperthermophilic archaeon, termed strain T7324<sup>T</sup>, was isolated from a mixed sulfate-reducing consortium recovered from hot water produced from a deep North Sea oil reservoir. The isolate is a strict anaerobic chemo-organotroph able to utilize yeast extract or starch as...

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Main Authors: Nils-Kåre Birkeland, Boyke Bunk, Cathrin Spröer, Hans-Peter Klenk, Peter Schönheit
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Biology
Subjects:
Online Access:https://www.mdpi.com/2079-7737/10/5/387
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spelling doaj-67f0db43f4cb4e91b08c7f964144c6e82021-04-29T23:06:29ZengMDPI AGBiology2079-77372021-04-011038738710.3390/biology10050387<i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading ArchaeonNils-Kåre Birkeland0Boyke Bunk1Cathrin Spröer2Hans-Peter Klenk3Peter Schönheit4Department of Biological Sciences, University of Bergen, N-5020 Bergen, NorwayDepartment Bioinformatics and Databases, Leibniz Institute DSMZ, D-38124 Braunschweig, GermanyDepartment Bioinformatics and Databases, Leibniz Institute DSMZ, D-38124 Braunschweig, GermanySchool of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne NE1 7RU, UKInstitut für Allgemeine Mikrobiologie, Christian-Albrechts-Universität Kiel, D-24118 Kiel, GermanyA novel hyperthermophilic archaeon, termed strain T7324<sup>T</sup>, was isolated from a mixed sulfate-reducing consortium recovered from hot water produced from a deep North Sea oil reservoir. The isolate is a strict anaerobic chemo-organotroph able to utilize yeast extract or starch as a carbon source. The genes for a number of sugar degradation enzymes and glutamate dehydrogenase previously attributed to the sulfate reducing strain of the consortium (<i>Archaeoglobus fulgidus</i> strain 7324) were identified in the nearly completed genome sequence. Sequence analysis of the 16S rRNA gene placed the strain in the <i>Thermococcus</i> genus, but with an average nucleotide identity that is less than 90% to its closest relatives. Phylogenomic treeing reconstructions placed the strain on a distinct lineage clearly separated from other <i>Thermococcus</i> spp. The results indicate that the strain T7324<sup>T</sup> represents a novel species, for which the name <i>Thermococcus bergensis</i> sp. nov. is proposed. The type strain is T7324<sup>T</sup> (=DSM 27149<sup>T</sup> = KCTC 15808<sup>T</sup>).https://www.mdpi.com/2079-7737/10/5/387archaeahyperthermophilesoil-wellgenomedeep biosphere
collection DOAJ
language English
format Article
sources DOAJ
author Nils-Kåre Birkeland
Boyke Bunk
Cathrin Spröer
Hans-Peter Klenk
Peter Schönheit
spellingShingle Nils-Kåre Birkeland
Boyke Bunk
Cathrin Spröer
Hans-Peter Klenk
Peter Schönheit
<i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading Archaeon
Biology
archaea
hyperthermophiles
oil-well
genome
deep biosphere
author_facet Nils-Kåre Birkeland
Boyke Bunk
Cathrin Spröer
Hans-Peter Klenk
Peter Schönheit
author_sort Nils-Kåre Birkeland
title <i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading Archaeon
title_short <i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading Archaeon
title_full <i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading Archaeon
title_fullStr <i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading Archaeon
title_full_unstemmed <i>Thermococcus bergensis</i> sp. nov., a Novel Hyperthermophilic Starch-Degrading Archaeon
title_sort <i>thermococcus bergensis</i> sp. nov., a novel hyperthermophilic starch-degrading archaeon
publisher MDPI AG
series Biology
issn 2079-7737
publishDate 2021-04-01
description A novel hyperthermophilic archaeon, termed strain T7324<sup>T</sup>, was isolated from a mixed sulfate-reducing consortium recovered from hot water produced from a deep North Sea oil reservoir. The isolate is a strict anaerobic chemo-organotroph able to utilize yeast extract or starch as a carbon source. The genes for a number of sugar degradation enzymes and glutamate dehydrogenase previously attributed to the sulfate reducing strain of the consortium (<i>Archaeoglobus fulgidus</i> strain 7324) were identified in the nearly completed genome sequence. Sequence analysis of the 16S rRNA gene placed the strain in the <i>Thermococcus</i> genus, but with an average nucleotide identity that is less than 90% to its closest relatives. Phylogenomic treeing reconstructions placed the strain on a distinct lineage clearly separated from other <i>Thermococcus</i> spp. The results indicate that the strain T7324<sup>T</sup> represents a novel species, for which the name <i>Thermococcus bergensis</i> sp. nov. is proposed. The type strain is T7324<sup>T</sup> (=DSM 27149<sup>T</sup> = KCTC 15808<sup>T</sup>).
topic archaea
hyperthermophiles
oil-well
genome
deep biosphere
url https://www.mdpi.com/2079-7737/10/5/387
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