<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens
The bacterial strain KU011TH was isolated from the skin mucus of healthy bighead catfish. The strain is a Gram-negative coccobacillus that is nonmotile, aerobic, catalase positive, oxidase negative, and nonhemolytic. Sequence analyses of the housekeeping genes <i>16S rRNA</i>, <i>g...
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doaj-677e0e74be5b426e815d6adc394ad2572020-11-25T01:35:03ZengMDPI AGMicroorganisms2076-26072019-11-0171154910.3390/microorganisms7110549microorganisms7110549<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish PathogensAnurak Bunnoy0Uthairat Na-Nakorn1Pattanapon Kayansamruaj2Prapansak Srisapoome3Laboratory of Aquatic Animal Health Management, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandLaboratory of Aquatic Animal Genetics, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandLaboratory of Aquatic Animal Health Management, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandLaboratory of Aquatic Animal Health Management, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandThe bacterial strain KU011TH was isolated from the skin mucus of healthy bighead catfish. The strain is a Gram-negative coccobacillus that is nonmotile, aerobic, catalase positive, oxidase negative, and nonhemolytic. Sequence analyses of the housekeeping genes <i>16S rRNA</i>, <i>gyrB</i> and <i>rpoB</i> indicate that this strain is a new member of the Acb complex of the genus <i>Acinetobacter</i> and is closely related to <i>Acinetobacter </i><i>pittii</i><i> </i>and <i>Acinetobacter </i><i>lactucae</i><i>. </i>In addition<i>, </i>the genome relatedness-associated ANIb (<95−96%) and <i>in silico</i> DDH (<70%) values clearly supported the new member of the genus <i>Acinetobacter </i>and the Acb complex. The genome of the strain KU011TH was approximately 3.79 Mbp in size, comprising 3619 predicted genes, and the DNA G+C content was 38.56 mol%. The major cellular fatty acids were C18:1ω9c, C16:0, C16:1, C20:2, C18:2ω6c and C18:1ω9t. The whole-genome sequences and phenotypic, phylogenetic, and chemotaxonomic data clearly support the classification of the strain KU011TH as a new member in the genus <i>Acinetobacter</i> which is closest to <i>A. pittii.</i> Additionally, the new bacterial strain exhibited strong activity against a broad range of freshwater fish pathogens <i>in vitro</i>.https://www.mdpi.com/2076-2607/7/11/549acinetobacter16s rrnagyrbrpobgenome sequenceaniin silico ddhclarias microcephalusprobioticsantagonistsacb complex |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Anurak Bunnoy Uthairat Na-Nakorn Pattanapon Kayansamruaj Prapansak Srisapoome |
spellingShingle |
Anurak Bunnoy Uthairat Na-Nakorn Pattanapon Kayansamruaj Prapansak Srisapoome <i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens Microorganisms acinetobacter 16s rrna gyrb rpob genome sequence ani in silico ddh clarias microcephalus probiotics antagonists acb complex |
author_facet |
Anurak Bunnoy Uthairat Na-Nakorn Pattanapon Kayansamruaj Prapansak Srisapoome |
author_sort |
Anurak Bunnoy |
title |
<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens |
title_short |
<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens |
title_full |
<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens |
title_fullStr |
<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens |
title_full_unstemmed |
<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens |
title_sort |
<i>acinetobacter </i>strain kuo11th, a unique organism related to <i>acinetobacter pittii</i> and isolated from the skin mucus of healthy bighead catfish and its efficacy against several fish pathogens |
publisher |
MDPI AG |
series |
Microorganisms |
issn |
2076-2607 |
publishDate |
2019-11-01 |
description |
The bacterial strain KU011TH was isolated from the skin mucus of healthy bighead catfish. The strain is a Gram-negative coccobacillus that is nonmotile, aerobic, catalase positive, oxidase negative, and nonhemolytic. Sequence analyses of the housekeeping genes <i>16S rRNA</i>, <i>gyrB</i> and <i>rpoB</i> indicate that this strain is a new member of the Acb complex of the genus <i>Acinetobacter</i> and is closely related to <i>Acinetobacter </i><i>pittii</i><i> </i>and <i>Acinetobacter </i><i>lactucae</i><i>. </i>In addition<i>, </i>the genome relatedness-associated ANIb (<95−96%) and <i>in silico</i> DDH (<70%) values clearly supported the new member of the genus <i>Acinetobacter </i>and the Acb complex. The genome of the strain KU011TH was approximately 3.79 Mbp in size, comprising 3619 predicted genes, and the DNA G+C content was 38.56 mol%. The major cellular fatty acids were C18:1ω9c, C16:0, C16:1, C20:2, C18:2ω6c and C18:1ω9t. The whole-genome sequences and phenotypic, phylogenetic, and chemotaxonomic data clearly support the classification of the strain KU011TH as a new member in the genus <i>Acinetobacter</i> which is closest to <i>A. pittii.</i> Additionally, the new bacterial strain exhibited strong activity against a broad range of freshwater fish pathogens <i>in vitro</i>. |
topic |
acinetobacter 16s rrna gyrb rpob genome sequence ani in silico ddh clarias microcephalus probiotics antagonists acb complex |
url |
https://www.mdpi.com/2076-2607/7/11/549 |
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