<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens

The bacterial strain KU011TH was isolated from the skin mucus of healthy bighead catfish. The strain is a Gram-negative coccobacillus that is nonmotile, aerobic, catalase positive, oxidase negative, and nonhemolytic. Sequence analyses of the housekeeping genes <i>16S rRNA</i>, <i>g...

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Main Authors: Anurak Bunnoy, Uthairat Na-Nakorn, Pattanapon Kayansamruaj, Prapansak Srisapoome
Format: Article
Language:English
Published: MDPI AG 2019-11-01
Series:Microorganisms
Subjects:
ani
Online Access:https://www.mdpi.com/2076-2607/7/11/549
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spelling doaj-677e0e74be5b426e815d6adc394ad2572020-11-25T01:35:03ZengMDPI AGMicroorganisms2076-26072019-11-0171154910.3390/microorganisms7110549microorganisms7110549<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish PathogensAnurak Bunnoy0Uthairat Na-Nakorn1Pattanapon Kayansamruaj2Prapansak Srisapoome3Laboratory of Aquatic Animal Health Management, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandLaboratory of Aquatic Animal Genetics, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandLaboratory of Aquatic Animal Health Management, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandLaboratory of Aquatic Animal Health Management, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, ThailandThe bacterial strain KU011TH was isolated from the skin mucus of healthy bighead catfish. The strain is a Gram-negative coccobacillus that is nonmotile, aerobic, catalase positive, oxidase negative, and nonhemolytic. Sequence analyses of the housekeeping genes <i>16S rRNA</i>, <i>gyrB</i> and <i>rpoB</i> indicate that this strain is a new member of the Acb complex of the genus <i>Acinetobacter</i> and is closely related to <i>Acinetobacter </i><i>pittii</i><i> </i>and <i>Acinetobacter </i><i>lactucae</i><i>. </i>In addition<i>, </i>the genome relatedness-associated ANIb (&lt;95&#8722;96%) and <i>in silico</i> DDH (&lt;70%) values clearly supported the new member of the genus <i>Acinetobacter </i>and the Acb complex. The genome of the strain KU011TH was approximately 3.79 Mbp in size, comprising 3619 predicted genes, and the DNA G+C content was 38.56 mol%. The major cellular fatty acids were C18:1&#969;9c, C16:0, C16:1, C20:2, C18:2&#969;6c and C18:1&#969;9t. The whole-genome sequences and phenotypic, phylogenetic, and chemotaxonomic data clearly support the classification of the strain KU011TH as a new member in the genus <i>Acinetobacter</i> which is closest to <i>A. pittii.</i> Additionally, the new bacterial strain exhibited strong activity against a broad range of freshwater fish pathogens <i>in vitro</i>.https://www.mdpi.com/2076-2607/7/11/549acinetobacter16s rrnagyrbrpobgenome sequenceaniin silico ddhclarias microcephalusprobioticsantagonistsacb complex
collection DOAJ
language English
format Article
sources DOAJ
author Anurak Bunnoy
Uthairat Na-Nakorn
Pattanapon Kayansamruaj
Prapansak Srisapoome
spellingShingle Anurak Bunnoy
Uthairat Na-Nakorn
Pattanapon Kayansamruaj
Prapansak Srisapoome
<i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens
Microorganisms
acinetobacter
16s rrna
gyrb
rpob
genome sequence
ani
in silico ddh
clarias microcephalus
probiotics
antagonists
acb complex
author_facet Anurak Bunnoy
Uthairat Na-Nakorn
Pattanapon Kayansamruaj
Prapansak Srisapoome
author_sort Anurak Bunnoy
title <i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens
title_short <i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens
title_full <i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens
title_fullStr <i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens
title_full_unstemmed <i>Acinetobacter </i>Strain KUO11TH, a Unique Organism Related to <i>Acinetobacter pittii</i> and Isolated from the Skin Mucus of Healthy Bighead Catfish and Its Efficacy Against Several Fish Pathogens
title_sort <i>acinetobacter </i>strain kuo11th, a unique organism related to <i>acinetobacter pittii</i> and isolated from the skin mucus of healthy bighead catfish and its efficacy against several fish pathogens
publisher MDPI AG
series Microorganisms
issn 2076-2607
publishDate 2019-11-01
description The bacterial strain KU011TH was isolated from the skin mucus of healthy bighead catfish. The strain is a Gram-negative coccobacillus that is nonmotile, aerobic, catalase positive, oxidase negative, and nonhemolytic. Sequence analyses of the housekeeping genes <i>16S rRNA</i>, <i>gyrB</i> and <i>rpoB</i> indicate that this strain is a new member of the Acb complex of the genus <i>Acinetobacter</i> and is closely related to <i>Acinetobacter </i><i>pittii</i><i> </i>and <i>Acinetobacter </i><i>lactucae</i><i>. </i>In addition<i>, </i>the genome relatedness-associated ANIb (&lt;95&#8722;96%) and <i>in silico</i> DDH (&lt;70%) values clearly supported the new member of the genus <i>Acinetobacter </i>and the Acb complex. The genome of the strain KU011TH was approximately 3.79 Mbp in size, comprising 3619 predicted genes, and the DNA G+C content was 38.56 mol%. The major cellular fatty acids were C18:1&#969;9c, C16:0, C16:1, C20:2, C18:2&#969;6c and C18:1&#969;9t. The whole-genome sequences and phenotypic, phylogenetic, and chemotaxonomic data clearly support the classification of the strain KU011TH as a new member in the genus <i>Acinetobacter</i> which is closest to <i>A. pittii.</i> Additionally, the new bacterial strain exhibited strong activity against a broad range of freshwater fish pathogens <i>in vitro</i>.
topic acinetobacter
16s rrna
gyrb
rpob
genome sequence
ani
in silico ddh
clarias microcephalus
probiotics
antagonists
acb complex
url https://www.mdpi.com/2076-2607/7/11/549
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