Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>

Bacteriophages vB_YpeM_fEV-1 (fEV-1) and vB_YpeM_fD1 (fD1) were isolated from incoming sewage water samples in Turku, Finland, using <i>Yersinia pestis</i> strains EV76 and KIM D27 as enrichment hosts, respectively. Genomic analysis and transmission electron microscopy established that f...

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Main Authors: Mikael Skurnik, Salla Jaakkola, Laura Mattinen, Lotta von Ossowski, Ayesha Nawaz, Maria I. Pajunen, Lotta J. Happonen
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/13/7/1384
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spelling doaj-6768e388764248529503b6091154b4602021-07-23T14:11:44ZengMDPI AGViruses1999-49152021-07-01131384138410.3390/v13071384Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>Mikael Skurnik0Salla Jaakkola1Laura Mattinen2Lotta von Ossowski3Ayesha Nawaz4Maria I. Pajunen5Lotta J. Happonen6Department of Bacteriology and Immunology, Medicum, Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, 00290 Helsinki, FinlandDepartment of Bacteriology and Immunology, Medicum, Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, 00290 Helsinki, FinlandDepartment of Bacteriology and Immunology, Medicum, Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, 00290 Helsinki, FinlandDepartment of Medical Biochemistry, University of Turku, 20520 Turku, FinlandDepartment of Bacteriology and Immunology, Medicum, Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, 00290 Helsinki, FinlandDepartment of Bacteriology and Immunology, Medicum, Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, 00290 Helsinki, FinlandDivision of Infection Medicine, Department of Clinical Sciences Lund, Lund University, 22184 Lund, SwedenBacteriophages vB_YpeM_fEV-1 (fEV-1) and vB_YpeM_fD1 (fD1) were isolated from incoming sewage water samples in Turku, Finland, using <i>Yersinia pestis</i> strains EV76 and KIM D27 as enrichment hosts, respectively. Genomic analysis and transmission electron microscopy established that fEV-1 is a novel type of dwarf myovirus, while fD1 is a T4-like myovirus. The genome sizes are 38 and 167 kb, respectively. To date, the morphology and genome sequences of some dwarf myoviruses have been described; however, a proteome characterization such as the one presented here, has currently been lacking for this group of viruses. Notably, fEV-1 is the first dwarf myovirus described for <i>Y. pestis</i>. The host range of fEV-1 was restricted strictly to <i>Y. pestis</i> strains, while that of fD1 also included other members of Enterobacterales such as <i>Escherichia coli</i> and <i>Yersinia pseudotuberculosis</i>. In this study, we present the life cycles, genomes, and proteomes of two <i>Yersinia</i> myoviruses, fEV-1 and fD1.https://www.mdpi.com/1999-4915/13/7/1384bacteriophage<i>Yersinia pestis</i>dwarf myovirusmyovirusgenomeproteome
collection DOAJ
language English
format Article
sources DOAJ
author Mikael Skurnik
Salla Jaakkola
Laura Mattinen
Lotta von Ossowski
Ayesha Nawaz
Maria I. Pajunen
Lotta J. Happonen
spellingShingle Mikael Skurnik
Salla Jaakkola
Laura Mattinen
Lotta von Ossowski
Ayesha Nawaz
Maria I. Pajunen
Lotta J. Happonen
Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>
Viruses
bacteriophage
<i>Yersinia pestis</i>
dwarf myovirus
myovirus
genome
proteome
author_facet Mikael Skurnik
Salla Jaakkola
Laura Mattinen
Lotta von Ossowski
Ayesha Nawaz
Maria I. Pajunen
Lotta J. Happonen
author_sort Mikael Skurnik
title Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>
title_short Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>
title_full Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>
title_fullStr Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>
title_full_unstemmed Bacteriophages fEV-1 and fD1 Infect <i>Yersinia pestis</i>
title_sort bacteriophages fev-1 and fd1 infect <i>yersinia pestis</i>
publisher MDPI AG
series Viruses
issn 1999-4915
publishDate 2021-07-01
description Bacteriophages vB_YpeM_fEV-1 (fEV-1) and vB_YpeM_fD1 (fD1) were isolated from incoming sewage water samples in Turku, Finland, using <i>Yersinia pestis</i> strains EV76 and KIM D27 as enrichment hosts, respectively. Genomic analysis and transmission electron microscopy established that fEV-1 is a novel type of dwarf myovirus, while fD1 is a T4-like myovirus. The genome sizes are 38 and 167 kb, respectively. To date, the morphology and genome sequences of some dwarf myoviruses have been described; however, a proteome characterization such as the one presented here, has currently been lacking for this group of viruses. Notably, fEV-1 is the first dwarf myovirus described for <i>Y. pestis</i>. The host range of fEV-1 was restricted strictly to <i>Y. pestis</i> strains, while that of fD1 also included other members of Enterobacterales such as <i>Escherichia coli</i> and <i>Yersinia pseudotuberculosis</i>. In this study, we present the life cycles, genomes, and proteomes of two <i>Yersinia</i> myoviruses, fEV-1 and fD1.
topic bacteriophage
<i>Yersinia pestis</i>
dwarf myovirus
myovirus
genome
proteome
url https://www.mdpi.com/1999-4915/13/7/1384
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