Insights into multimodal imaging classification of ADHD

Attention deficit hyperactivity disorder (ADHD) currently is diagnosed in children by clinicians via subjective ADHD-specific behavioral instruments and by reports from the parents and teachers. Considering its high prevalence and large economic and societal costs, a quantitative tool that aids in d...

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Main Authors: John B Colby, Jeffrey D Rudie, Jesse A Brown, Pamela K Douglas, Mark S Cohen, Zarrar eShehzad
Format: Article
Language:English
Published: Frontiers Media S.A. 2012-08-01
Series:Frontiers in Systems Neuroscience
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fnsys.2012.00059/full
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spelling doaj-67623ce601384a529e5394650ba6ba232020-11-24T20:51:31ZengFrontiers Media S.A.Frontiers in Systems Neuroscience1662-51372012-08-01610.3389/fnsys.2012.0005928382Insights into multimodal imaging classification of ADHDJohn B Colby0Jeffrey D Rudie1Jesse A Brown2Pamela K Douglas3Mark S Cohen4Zarrar eShehzad5University of California Los AngelesUniversity of California Los AngelesUniversity of California Los AngelesUniversity of California Los AngelesUniversity of California Los AngelesYale UniversityAttention deficit hyperactivity disorder (ADHD) currently is diagnosed in children by clinicians via subjective ADHD-specific behavioral instruments and by reports from the parents and teachers. Considering its high prevalence and large economic and societal costs, a quantitative tool that aids in diagnosis by characterizing underlying neurobiology would be extremely valuable. This provided motivation for the ADHD-200 machine learning (ML) competition, a multisite collaborative effort to investigate imaging classifiers for ADHD. Here we present our ML approach, which used structural and functional magnetic resonance imaging data, combined with demographic information, to predict diagnostic status of individuals with ADHD from typically developing children across eight different research sites. Structural features included quantitative metrics from 113 cortical and non-cortical regions. Functional features included Pearson correlation functional connectivity matrices, nodal and global graph theoretical measures, nodal power spectra, voxelwise global connectivity, and voxelwise regional homogeneity. We performed feature ranking for each site and modality using the multiple support vector machine recursive feature elimination algorithm, and feature subset selection by optimizing the expected generalization performance of a radial basis function kernel SVM (RBF-SVM) trained across a range of the top features. Site-specific RBF-SVMs using these optimal feature sets from each imaging modality were used to predict the class labels of an independent hold-out test set. A voting approach was used to combine these multiple predictions and assign final class labels. With this methodology we were able to predict diagnosis of ADHD with 55% accuracy (versus a 39% chance level in this sample), 33% sensitivity, and 80% specificity. This approach also allowed us to evaluate predictive structural and functional features giving insight into abnormal brain circuitry in ADHD.http://journal.frontiersin.org/Journal/10.3389/fnsys.2012.00059/fullClassificationfMRImachine learningfunctional connectivityAttention Deficit Hyperactivity Disordergraph theory
collection DOAJ
language English
format Article
sources DOAJ
author John B Colby
Jeffrey D Rudie
Jesse A Brown
Pamela K Douglas
Mark S Cohen
Zarrar eShehzad
spellingShingle John B Colby
Jeffrey D Rudie
Jesse A Brown
Pamela K Douglas
Mark S Cohen
Zarrar eShehzad
Insights into multimodal imaging classification of ADHD
Frontiers in Systems Neuroscience
Classification
fMRI
machine learning
functional connectivity
Attention Deficit Hyperactivity Disorder
graph theory
author_facet John B Colby
Jeffrey D Rudie
Jesse A Brown
Pamela K Douglas
Mark S Cohen
Zarrar eShehzad
author_sort John B Colby
title Insights into multimodal imaging classification of ADHD
title_short Insights into multimodal imaging classification of ADHD
title_full Insights into multimodal imaging classification of ADHD
title_fullStr Insights into multimodal imaging classification of ADHD
title_full_unstemmed Insights into multimodal imaging classification of ADHD
title_sort insights into multimodal imaging classification of adhd
publisher Frontiers Media S.A.
series Frontiers in Systems Neuroscience
issn 1662-5137
publishDate 2012-08-01
description Attention deficit hyperactivity disorder (ADHD) currently is diagnosed in children by clinicians via subjective ADHD-specific behavioral instruments and by reports from the parents and teachers. Considering its high prevalence and large economic and societal costs, a quantitative tool that aids in diagnosis by characterizing underlying neurobiology would be extremely valuable. This provided motivation for the ADHD-200 machine learning (ML) competition, a multisite collaborative effort to investigate imaging classifiers for ADHD. Here we present our ML approach, which used structural and functional magnetic resonance imaging data, combined with demographic information, to predict diagnostic status of individuals with ADHD from typically developing children across eight different research sites. Structural features included quantitative metrics from 113 cortical and non-cortical regions. Functional features included Pearson correlation functional connectivity matrices, nodal and global graph theoretical measures, nodal power spectra, voxelwise global connectivity, and voxelwise regional homogeneity. We performed feature ranking for each site and modality using the multiple support vector machine recursive feature elimination algorithm, and feature subset selection by optimizing the expected generalization performance of a radial basis function kernel SVM (RBF-SVM) trained across a range of the top features. Site-specific RBF-SVMs using these optimal feature sets from each imaging modality were used to predict the class labels of an independent hold-out test set. A voting approach was used to combine these multiple predictions and assign final class labels. With this methodology we were able to predict diagnosis of ADHD with 55% accuracy (versus a 39% chance level in this sample), 33% sensitivity, and 80% specificity. This approach also allowed us to evaluate predictive structural and functional features giving insight into abnormal brain circuitry in ADHD.
topic Classification
fMRI
machine learning
functional connectivity
Attention Deficit Hyperactivity Disorder
graph theory
url http://journal.frontiersin.org/Journal/10.3389/fnsys.2012.00059/full
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