Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.

Changes in the shape of the lung during breathing determine the movement of airways and alveoli, and thus impact airflow dynamics. Modeling airflow dynamics in health and disease is a key goal for predictive multiscale models of respiration. Past efforts to model changes in lung shape during breathi...

Full description

Bibliographic Details
Main Authors: Richard E Jacob, James P Carson, Mathew Thomas, Daniel R Einstein
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3683027?pdf=render
id doaj-65566948db504ac18596788b693374f0
record_format Article
spelling doaj-65566948db504ac18596788b693374f02020-11-25T01:17:14ZengPublic Library of Science (PLoS)PLoS ONE1932-62032013-01-0186e6587410.1371/journal.pone.0065874Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.Richard E JacobJames P CarsonMathew ThomasDaniel R EinsteinChanges in the shape of the lung during breathing determine the movement of airways and alveoli, and thus impact airflow dynamics. Modeling airflow dynamics in health and disease is a key goal for predictive multiscale models of respiration. Past efforts to model changes in lung shape during breathing have measured shape at multiple breath-holds. However, breath-holds do not capture hysteretic differences between inspiration and expiration resulting from the additional energy required for inspiration. Alternatively, imaging dynamically--without breath-holds--allows measurement of hysteretic differences. In this study, we acquire multiple micro-CT images per breath (4DCT) in live rats, and from these images we develop, for the first time, dynamic volume maps. These maps show changes in local volume across the entire lung throughout the breathing cycle and accurately predict the global pressure-volume (PV) hysteresis. Male Sprague-Dawley rats were given either a full- or partial-lung dose of elastase or saline as a control. After three weeks, 4DCT images of the mechanically ventilated rats under anesthesia were acquired dynamically over the breathing cycle (11 time points, ≤100 ms temporal resolution, 8 cmH2O peak pressure). Non-rigid image registration was applied to determine the deformation gradient--a numerical description of changes to lung shape--at each time point. The registration accuracy was evaluated by landmark identification. Of 67 landmarks, one was determined misregistered by all three observers, and 11 were determined misregistered by two observers. Volume change maps were calculated on a voxel-by-voxel basis at all time points using both the Jacobian of the deformation gradient and the inhaled air fraction. The calculated lung PV hysteresis agrees with pressure-volume curves measured by the ventilator. Volume maps in diseased rats show increased compliance and ventilation heterogeneity. Future predictive multiscale models of rodent respiration may leverage such volume maps as boundary conditions.http://europepmc.org/articles/PMC3683027?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Richard E Jacob
James P Carson
Mathew Thomas
Daniel R Einstein
spellingShingle Richard E Jacob
James P Carson
Mathew Thomas
Daniel R Einstein
Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.
PLoS ONE
author_facet Richard E Jacob
James P Carson
Mathew Thomas
Daniel R Einstein
author_sort Richard E Jacob
title Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.
title_short Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.
title_full Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.
title_fullStr Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.
title_full_unstemmed Dynamic multiscale boundary conditions for 4D CT of healthy and emphysematous rats.
title_sort dynamic multiscale boundary conditions for 4d ct of healthy and emphysematous rats.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2013-01-01
description Changes in the shape of the lung during breathing determine the movement of airways and alveoli, and thus impact airflow dynamics. Modeling airflow dynamics in health and disease is a key goal for predictive multiscale models of respiration. Past efforts to model changes in lung shape during breathing have measured shape at multiple breath-holds. However, breath-holds do not capture hysteretic differences between inspiration and expiration resulting from the additional energy required for inspiration. Alternatively, imaging dynamically--without breath-holds--allows measurement of hysteretic differences. In this study, we acquire multiple micro-CT images per breath (4DCT) in live rats, and from these images we develop, for the first time, dynamic volume maps. These maps show changes in local volume across the entire lung throughout the breathing cycle and accurately predict the global pressure-volume (PV) hysteresis. Male Sprague-Dawley rats were given either a full- or partial-lung dose of elastase or saline as a control. After three weeks, 4DCT images of the mechanically ventilated rats under anesthesia were acquired dynamically over the breathing cycle (11 time points, ≤100 ms temporal resolution, 8 cmH2O peak pressure). Non-rigid image registration was applied to determine the deformation gradient--a numerical description of changes to lung shape--at each time point. The registration accuracy was evaluated by landmark identification. Of 67 landmarks, one was determined misregistered by all three observers, and 11 were determined misregistered by two observers. Volume change maps were calculated on a voxel-by-voxel basis at all time points using both the Jacobian of the deformation gradient and the inhaled air fraction. The calculated lung PV hysteresis agrees with pressure-volume curves measured by the ventilator. Volume maps in diseased rats show increased compliance and ventilation heterogeneity. Future predictive multiscale models of rodent respiration may leverage such volume maps as boundary conditions.
url http://europepmc.org/articles/PMC3683027?pdf=render
work_keys_str_mv AT richardejacob dynamicmultiscaleboundaryconditionsfor4dctofhealthyandemphysematousrats
AT jamespcarson dynamicmultiscaleboundaryconditionsfor4dctofhealthyandemphysematousrats
AT mathewthomas dynamicmultiscaleboundaryconditionsfor4dctofhealthyandemphysematousrats
AT danielreinstein dynamicmultiscaleboundaryconditionsfor4dctofhealthyandemphysematousrats
_version_ 1725147270139084800