Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model
We propose a chemical language processing model to predict polymers’ glass transition temperature (<inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><msub><mi>T</mi><mi>g</mi></msub>&...
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doaj-6382405dfbc94761907739242df058c92021-06-30T23:33:51ZengMDPI AGPolymers2073-43602021-06-01131898189810.3390/polym13111898Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing ModelGuang Chen0Lei Tao1Ying Li2Department of Mechanical Engineering, University of Connecticut, Storrs, CT 06269, USADepartment of Mechanical Engineering, University of Connecticut, Storrs, CT 06269, USADepartment of Mechanical Engineering, University of Connecticut, Storrs, CT 06269, USAWe propose a chemical language processing model to predict polymers’ glass transition temperature (<inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><msub><mi>T</mi><mi>g</mi></msub></semantics></math></inline-formula>) through a polymer language (SMILES, Simplified Molecular Input Line Entry System) embedding and recurrent neural network. This model only receives the SMILES strings of a polymer’s repeat units as inputs and considers the SMILES strings as sequential data at the character level. Using this method, there is no need to calculate any additional molecular descriptors or fingerprints of polymers, and thereby, being very computationally efficient. More importantly, it avoids the difficulties to generate molecular descriptors for repeat units containing polymerization point ‘*’. Results show that the trained model demonstrates reasonable prediction performance on unseen polymer’s <inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><msub><mi>T</mi><mi>g</mi></msub></semantics></math></inline-formula>. Besides, this model is further applied for high-throughput screening on an unlabeled polymer database to identify high-temperature polymers that are desired for applications in extreme environments. Our work demonstrates that the SMILES strings of polymer repeat units can be used as an effective feature representation to develop a chemical language processing model for predictions of polymer <inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><msub><mi>T</mi><mi>g</mi></msub></semantics></math></inline-formula>. The framework of this model is general and can be used to construct structure–property relationships for other polymer properties.https://www.mdpi.com/2073-4360/13/11/1898polymer informaticsmachine learningglass transition temperaturehigh-throughput screeningrecurrent neural network |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Guang Chen Lei Tao Ying Li |
spellingShingle |
Guang Chen Lei Tao Ying Li Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model Polymers polymer informatics machine learning glass transition temperature high-throughput screening recurrent neural network |
author_facet |
Guang Chen Lei Tao Ying Li |
author_sort |
Guang Chen |
title |
Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_short |
Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_full |
Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_fullStr |
Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_full_unstemmed |
Predicting Polymers’ Glass Transition Temperature by a Chemical Language Processing Model |
title_sort |
predicting polymers’ glass transition temperature by a chemical language processing model |
publisher |
MDPI AG |
series |
Polymers |
issn |
2073-4360 |
publishDate |
2021-06-01 |
description |
We propose a chemical language processing model to predict polymers’ glass transition temperature (<inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><msub><mi>T</mi><mi>g</mi></msub></semantics></math></inline-formula>) through a polymer language (SMILES, Simplified Molecular Input Line Entry System) embedding and recurrent neural network. This model only receives the SMILES strings of a polymer’s repeat units as inputs and considers the SMILES strings as sequential data at the character level. Using this method, there is no need to calculate any additional molecular descriptors or fingerprints of polymers, and thereby, being very computationally efficient. More importantly, it avoids the difficulties to generate molecular descriptors for repeat units containing polymerization point ‘*’. Results show that the trained model demonstrates reasonable prediction performance on unseen polymer’s <inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><msub><mi>T</mi><mi>g</mi></msub></semantics></math></inline-formula>. Besides, this model is further applied for high-throughput screening on an unlabeled polymer database to identify high-temperature polymers that are desired for applications in extreme environments. Our work demonstrates that the SMILES strings of polymer repeat units can be used as an effective feature representation to develop a chemical language processing model for predictions of polymer <inline-formula><math xmlns="http://www.w3.org/1998/Math/MathML" display="inline"><semantics><msub><mi>T</mi><mi>g</mi></msub></semantics></math></inline-formula>. The framework of this model is general and can be used to construct structure–property relationships for other polymer properties. |
topic |
polymer informatics machine learning glass transition temperature high-throughput screening recurrent neural network |
url |
https://www.mdpi.com/2073-4360/13/11/1898 |
work_keys_str_mv |
AT guangchen predictingpolymersglasstransitiontemperaturebyachemicallanguageprocessingmodel AT leitao predictingpolymersglasstransitiontemperaturebyachemicallanguageprocessingmodel AT yingli predictingpolymersglasstransitiontemperaturebyachemicallanguageprocessingmodel |
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1721350995393380352 |