Identification of Novel Biomarkers and Candidate Drug in Ovarian Cancer

This paper investigates the expression of the CREB1 gene in ovarian cancer (OV) by deeply excavating the gene information in the multiple databases and the mechanism thereof. In short, we found that the expression of the CREB1 gene in ovarian cancer tissue was significantly higher than that of norma...

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Main Authors: Chia-Jung Li, Li-Te Lin, Pei-Yi Chu, An-Jen Chiang, Hsiao-Wen Tsai, Yi-Han Chiu, Mei-Shu Huang, Zhi-Hong Wen, Kuan-Hao Tsui
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Journal of Personalized Medicine
Subjects:
Online Access:https://www.mdpi.com/2075-4426/11/4/316
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spelling doaj-6380286d80be49c28361212964f785a72021-04-19T23:01:56ZengMDPI AGJournal of Personalized Medicine2075-44262021-04-011131631610.3390/jpm11040316Identification of Novel Biomarkers and Candidate Drug in Ovarian CancerChia-Jung Li0Li-Te Lin1Pei-Yi Chu2An-Jen Chiang3Hsiao-Wen Tsai4Yi-Han Chiu5Mei-Shu Huang6Zhi-Hong Wen7Kuan-Hao Tsui8Department of Obstetrics and Gynaecology, Kaohsiung Veterans General Hospital, Kaohsiung 813, TaiwanDepartment of Obstetrics and Gynaecology, Kaohsiung Veterans General Hospital, Kaohsiung 813, TaiwanSchool of Medicine, College of Medicine, Fu Jen Catholic University, New Taipei 242, TaiwanDepartment of Obstetrics and Gynaecology, Kaohsiung Veterans General Hospital, Kaohsiung 813, TaiwanDepartment of Obstetrics and Gynaecology, Kaohsiung Veterans General Hospital, Kaohsiung 813, TaiwanDepartment of Microbiology, Soochow University, Taipei 111, TaiwanDepartment of Obstetrics and Gynaecology, Kaohsiung Veterans General Hospital, Kaohsiung 813, TaiwanDepartment of Marine Biotechnology and Resources, National Sun Yat-sen University, Kaohsiung 804, TaiwanDepartment of Obstetrics and Gynaecology, Kaohsiung Veterans General Hospital, Kaohsiung 813, TaiwanThis paper investigates the expression of the CREB1 gene in ovarian cancer (OV) by deeply excavating the gene information in the multiple databases and the mechanism thereof. In short, we found that the expression of the CREB1 gene in ovarian cancer tissue was significantly higher than that of normal ovarian tissue. Kaplan–Meier survival analysis showed that the overall survival was significantly shorter in patients with high expression of the CREB1 gene than those in patients with low expression of the CREB1 gene, and the prognosis of patients with low expression of the CREB1 gene was better. The CREB1 gene may play a role in the occurrence and development of ovarian cancer by regulating the process of protein. Based on differentially expressed genes, 20 small-molecule drugs that potentially target CREB1 with abnormal expression in OV were obtained from the CMap database. Among these compounds, we found that naloxone has the greatest therapeutic value for OV. The high expression of the CREB1 gene may be an indicator of poor prognosis in ovarian cancer patients. Targeting CREB1 may be a potential tool for the diagnosis and treatment of OV.https://www.mdpi.com/2075-4426/11/4/316ovarian cancerbioinformaticsCREB1drug perturbation
collection DOAJ
language English
format Article
sources DOAJ
author Chia-Jung Li
Li-Te Lin
Pei-Yi Chu
An-Jen Chiang
Hsiao-Wen Tsai
Yi-Han Chiu
Mei-Shu Huang
Zhi-Hong Wen
Kuan-Hao Tsui
spellingShingle Chia-Jung Li
Li-Te Lin
Pei-Yi Chu
An-Jen Chiang
Hsiao-Wen Tsai
Yi-Han Chiu
Mei-Shu Huang
Zhi-Hong Wen
Kuan-Hao Tsui
Identification of Novel Biomarkers and Candidate Drug in Ovarian Cancer
Journal of Personalized Medicine
ovarian cancer
bioinformatics
CREB1
drug perturbation
author_facet Chia-Jung Li
Li-Te Lin
Pei-Yi Chu
An-Jen Chiang
Hsiao-Wen Tsai
Yi-Han Chiu
Mei-Shu Huang
Zhi-Hong Wen
Kuan-Hao Tsui
author_sort Chia-Jung Li
title Identification of Novel Biomarkers and Candidate Drug in Ovarian Cancer
title_short Identification of Novel Biomarkers and Candidate Drug in Ovarian Cancer
title_full Identification of Novel Biomarkers and Candidate Drug in Ovarian Cancer
title_fullStr Identification of Novel Biomarkers and Candidate Drug in Ovarian Cancer
title_full_unstemmed Identification of Novel Biomarkers and Candidate Drug in Ovarian Cancer
title_sort identification of novel biomarkers and candidate drug in ovarian cancer
publisher MDPI AG
series Journal of Personalized Medicine
issn 2075-4426
publishDate 2021-04-01
description This paper investigates the expression of the CREB1 gene in ovarian cancer (OV) by deeply excavating the gene information in the multiple databases and the mechanism thereof. In short, we found that the expression of the CREB1 gene in ovarian cancer tissue was significantly higher than that of normal ovarian tissue. Kaplan–Meier survival analysis showed that the overall survival was significantly shorter in patients with high expression of the CREB1 gene than those in patients with low expression of the CREB1 gene, and the prognosis of patients with low expression of the CREB1 gene was better. The CREB1 gene may play a role in the occurrence and development of ovarian cancer by regulating the process of protein. Based on differentially expressed genes, 20 small-molecule drugs that potentially target CREB1 with abnormal expression in OV were obtained from the CMap database. Among these compounds, we found that naloxone has the greatest therapeutic value for OV. The high expression of the CREB1 gene may be an indicator of poor prognosis in ovarian cancer patients. Targeting CREB1 may be a potential tool for the diagnosis and treatment of OV.
topic ovarian cancer
bioinformatics
CREB1
drug perturbation
url https://www.mdpi.com/2075-4426/11/4/316
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