Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s disease

Background: Alzheimer’s disease (AD) is a neurodegenerative disease that primarily manifests as progressive memory loss and cognitive impairment. Traditional herbal medicines may be helpful in the discovery of new anti-AD drugs. Studies have shown that Ferula assafoetida has neuroprotective and memo...

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Main Authors: Meng Xu, Lili Zhang, Pin Li, Chunguo Wang, Yuanyuan Shi
Format: Article
Language:English
Published: Elsevier 2020-04-01
Series:Journal of Traditional Chinese Medical Sciences
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2095754820300284
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spelling doaj-62b834ecb4d54369a3b8b69aad0a07472021-04-02T12:38:28ZengElsevierJournal of Traditional Chinese Medical Sciences2095-75482020-04-0172199209Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s diseaseMeng Xu0Lili Zhang1Pin Li2Chunguo Wang3Yuanyuan Shi4School of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, ChinaSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, ChinaSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, ChinaBeijing Institute of Chinese Medicine, Beijing University of Chinese Medicine, Beijing, 100029, ChinaSchool of Life Sciences, Beijing University of Chinese Medicine, Beijing, 102488, China; Corresponding author.Background: Alzheimer’s disease (AD) is a neurodegenerative disease that primarily manifests as progressive memory loss and cognitive impairment. Traditional herbal medicines may be helpful in the discovery of new anti-AD drugs. Studies have shown that Ferula assafoetida has neuroprotective and memory-enhancing effects, which may be beneficial for the treatment of AD. However, the combination of active ingredients and their mechanisms remain unclear. Therefore, we aimed to identify potential active ingredients in F. assafoetida and their mechanisms of action against AD by using network pharmacology. Methods: In our study, an integrated network pharmacological approach, that included adsorption, distribution, metabolism and excretion screening, target identification, network construction, topological analysis, gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis, and molecular docking, was used to predict the pharmacological material basis and potential mechanisms through which these ingredients may treat and prevent AD. Results: The results indicated that 12 key active ingredients, obtained by topological analysis (including farnesiferol a, conferol, farnesiferol b, ferulic acid, etc.), may be the primary pharmacological components that may ameliorate AD. The 2 key significant pathways identified are the cholinergic synapse signaling pathway (critical targets include ACHE, CHRM1, CHRM2, MAPK1, PIK3CA, PIK3CB, PIK3CD, and PIK3CG) and the AD signaling pathway (critical targets include APP, BACE1, GSK3B, MAPK1, NCSTN, NOS1, PSEN1). These critical targets are closely related to the regulation of three typical pathological features of AD [central nervous system (CNS) cholinergic hypofunction, amyloid-β (Aβ) plaques, and hyperphosphorylated tau proteins]. Finally, 14 critical targets in the 2 key significant pathways were validated by molecular docking analysis. Conclusion: F. assafoetida may be effective for alleviating AD symptoms, through multi-component, multi-target, and multi-pathway synergistic effects, associated with the multiple pathogenesis hypotheses of AD. Our study may provide certain clues for the further development and utilization of this natural herbal medicine.http://www.sciencedirect.com/science/article/pii/S2095754820300284Ferula assafoetidaAlzheimer’s diseaseNetwork pharmacologyMolecular dockingPharmacological mechanism
collection DOAJ
language English
format Article
sources DOAJ
author Meng Xu
Lili Zhang
Pin Li
Chunguo Wang
Yuanyuan Shi
spellingShingle Meng Xu
Lili Zhang
Pin Li
Chunguo Wang
Yuanyuan Shi
Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s disease
Journal of Traditional Chinese Medical Sciences
Ferula assafoetida
Alzheimer’s disease
Network pharmacology
Molecular docking
Pharmacological mechanism
author_facet Meng Xu
Lili Zhang
Pin Li
Chunguo Wang
Yuanyuan Shi
author_sort Meng Xu
title Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s disease
title_short Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s disease
title_full Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s disease
title_fullStr Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s disease
title_full_unstemmed Network pharmacology used to decode potential active ingredients in Ferula assafoetida and mechanisms for the application to Alzheimer’s disease
title_sort network pharmacology used to decode potential active ingredients in ferula assafoetida and mechanisms for the application to alzheimer’s disease
publisher Elsevier
series Journal of Traditional Chinese Medical Sciences
issn 2095-7548
publishDate 2020-04-01
description Background: Alzheimer’s disease (AD) is a neurodegenerative disease that primarily manifests as progressive memory loss and cognitive impairment. Traditional herbal medicines may be helpful in the discovery of new anti-AD drugs. Studies have shown that Ferula assafoetida has neuroprotective and memory-enhancing effects, which may be beneficial for the treatment of AD. However, the combination of active ingredients and their mechanisms remain unclear. Therefore, we aimed to identify potential active ingredients in F. assafoetida and their mechanisms of action against AD by using network pharmacology. Methods: In our study, an integrated network pharmacological approach, that included adsorption, distribution, metabolism and excretion screening, target identification, network construction, topological analysis, gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis, and molecular docking, was used to predict the pharmacological material basis and potential mechanisms through which these ingredients may treat and prevent AD. Results: The results indicated that 12 key active ingredients, obtained by topological analysis (including farnesiferol a, conferol, farnesiferol b, ferulic acid, etc.), may be the primary pharmacological components that may ameliorate AD. The 2 key significant pathways identified are the cholinergic synapse signaling pathway (critical targets include ACHE, CHRM1, CHRM2, MAPK1, PIK3CA, PIK3CB, PIK3CD, and PIK3CG) and the AD signaling pathway (critical targets include APP, BACE1, GSK3B, MAPK1, NCSTN, NOS1, PSEN1). These critical targets are closely related to the regulation of three typical pathological features of AD [central nervous system (CNS) cholinergic hypofunction, amyloid-β (Aβ) plaques, and hyperphosphorylated tau proteins]. Finally, 14 critical targets in the 2 key significant pathways were validated by molecular docking analysis. Conclusion: F. assafoetida may be effective for alleviating AD symptoms, through multi-component, multi-target, and multi-pathway synergistic effects, associated with the multiple pathogenesis hypotheses of AD. Our study may provide certain clues for the further development and utilization of this natural herbal medicine.
topic Ferula assafoetida
Alzheimer’s disease
Network pharmacology
Molecular docking
Pharmacological mechanism
url http://www.sciencedirect.com/science/article/pii/S2095754820300284
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