ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4

ADNP (Activity Dependent Neuroprotective Protein) is proposed as a neuroprotective protein whose aberrant expression has been frequently linked to rare neural developmental disorders and cancers, including the recently described neurodevelopmental Helsmoortel-Van der Aa syndrome. Recent studies have...

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Main Authors: XiaoYun Sun, WenJun Yu, Li Li, YuHua Sun
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-07-01
Series:Frontiers in Cell and Developmental Biology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fcell.2020.00553/full
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spelling doaj-621634cd769348fea90b62a94afb77612020-11-25T03:20:49ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2020-07-01810.3389/fcell.2020.00553519527ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4XiaoYun Sun0WenJun Yu1Li Li2YuHua Sun3YuHua Sun4The Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, ChinaThe Innovation of Seed Design, Chinese Academy of Sciences, Wuhan, ChinaHubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, ChinaThe Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, ChinaThe Innovation of Seed Design, Chinese Academy of Sciences, Wuhan, ChinaADNP (Activity Dependent Neuroprotective Protein) is proposed as a neuroprotective protein whose aberrant expression has been frequently linked to rare neural developmental disorders and cancers, including the recently described neurodevelopmental Helsmoortel-Van der Aa syndrome. Recent studies have suggested that ADNP functions as an important chromatin regulator. However, how ADNP-regulated chromatin mechanisms control gene expression and stem cell fate commitment remains unclear. Here we show that ADNP interacts with two chromatin remodelers, BRG1 and CHD4. ADNP is required for proper establishment of chromatin accessibility, nucleosome configuration, and bivalent histone modifications of developmental genes. Loss of ADNP leads to enhancer over-activation and increased ratio of H3K4me3/H3K27me3 at key primitive endoderm (PrE) gene promoters, resulting in prominent up-regulation of these genes and priming ES cell differentiation toward endodermal cell types. Thus, our work revealed a key role of ADNP in the establishment of local chromatin landscape and structure of developmental genes by association with BRG1 and CHD4. These findings provide further insights into the role of ADNP in the pathology of the Helsmoortel-Van der Aa syndrome.https://www.frontiersin.org/article/10.3389/fcell.2020.00553/fullADNPembryonic stem cellschromatinlineage-specifying genesBRG1CHD4
collection DOAJ
language English
format Article
sources DOAJ
author XiaoYun Sun
WenJun Yu
Li Li
YuHua Sun
YuHua Sun
spellingShingle XiaoYun Sun
WenJun Yu
Li Li
YuHua Sun
YuHua Sun
ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4
Frontiers in Cell and Developmental Biology
ADNP
embryonic stem cells
chromatin
lineage-specifying genes
BRG1
CHD4
author_facet XiaoYun Sun
WenJun Yu
Li Li
YuHua Sun
YuHua Sun
author_sort XiaoYun Sun
title ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4
title_short ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4
title_full ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4
title_fullStr ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4
title_full_unstemmed ADNP Controls Gene Expression Through Local Chromatin Architecture by Association With BRG1 and CHD4
title_sort adnp controls gene expression through local chromatin architecture by association with brg1 and chd4
publisher Frontiers Media S.A.
series Frontiers in Cell and Developmental Biology
issn 2296-634X
publishDate 2020-07-01
description ADNP (Activity Dependent Neuroprotective Protein) is proposed as a neuroprotective protein whose aberrant expression has been frequently linked to rare neural developmental disorders and cancers, including the recently described neurodevelopmental Helsmoortel-Van der Aa syndrome. Recent studies have suggested that ADNP functions as an important chromatin regulator. However, how ADNP-regulated chromatin mechanisms control gene expression and stem cell fate commitment remains unclear. Here we show that ADNP interacts with two chromatin remodelers, BRG1 and CHD4. ADNP is required for proper establishment of chromatin accessibility, nucleosome configuration, and bivalent histone modifications of developmental genes. Loss of ADNP leads to enhancer over-activation and increased ratio of H3K4me3/H3K27me3 at key primitive endoderm (PrE) gene promoters, resulting in prominent up-regulation of these genes and priming ES cell differentiation toward endodermal cell types. Thus, our work revealed a key role of ADNP in the establishment of local chromatin landscape and structure of developmental genes by association with BRG1 and CHD4. These findings provide further insights into the role of ADNP in the pathology of the Helsmoortel-Van der Aa syndrome.
topic ADNP
embryonic stem cells
chromatin
lineage-specifying genes
BRG1
CHD4
url https://www.frontiersin.org/article/10.3389/fcell.2020.00553/full
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