Correlations and functional connections in a population of grid cells.

We study the statistics of spike trains of simultaneously recorded grid cells in freely behaving rats. We evaluate pairwise correlations between these cells and, using a maximum entropy kinetic pairwise model (kinetic Ising model), study their functional connectivity. Even when we account for the co...

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Main Authors: Benjamin Dunn, Maria Mørreaunet, Yasser Roudi
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2015-02-01
Series:PLoS Computational Biology
Online Access:http://europepmc.org/articles/PMC4340907?pdf=render
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spelling doaj-6161211326b6480089a9c02bf39cc0802020-11-24T21:12:25ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582015-02-01112e100405210.1371/journal.pcbi.1004052Correlations and functional connections in a population of grid cells.Benjamin DunnMaria MørreaunetYasser RoudiWe study the statistics of spike trains of simultaneously recorded grid cells in freely behaving rats. We evaluate pairwise correlations between these cells and, using a maximum entropy kinetic pairwise model (kinetic Ising model), study their functional connectivity. Even when we account for the covariations in firing rates due to overlapping fields, both the pairwise correlations and functional connections decay as a function of the shortest distance between the vertices of the spatial firing pattern of pairs of grid cells, i.e. their phase difference. They take positive values between cells with nearby phases and approach zero or negative values for larger phase differences. We find similar results also when, in addition to correlations due to overlapping fields, we account for correlations due to theta oscillations and head directional inputs. The inferred connections between neurons in the same module and those from different modules can be both negative and positive, with a mean close to zero, but with the strongest inferred connections found between cells of the same module. Taken together, our results suggest that grid cells in the same module do indeed form a local network of interconnected neurons with a functional connectivity that supports a role for attractor dynamics in the generation of grid pattern.http://europepmc.org/articles/PMC4340907?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Benjamin Dunn
Maria Mørreaunet
Yasser Roudi
spellingShingle Benjamin Dunn
Maria Mørreaunet
Yasser Roudi
Correlations and functional connections in a population of grid cells.
PLoS Computational Biology
author_facet Benjamin Dunn
Maria Mørreaunet
Yasser Roudi
author_sort Benjamin Dunn
title Correlations and functional connections in a population of grid cells.
title_short Correlations and functional connections in a population of grid cells.
title_full Correlations and functional connections in a population of grid cells.
title_fullStr Correlations and functional connections in a population of grid cells.
title_full_unstemmed Correlations and functional connections in a population of grid cells.
title_sort correlations and functional connections in a population of grid cells.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2015-02-01
description We study the statistics of spike trains of simultaneously recorded grid cells in freely behaving rats. We evaluate pairwise correlations between these cells and, using a maximum entropy kinetic pairwise model (kinetic Ising model), study their functional connectivity. Even when we account for the covariations in firing rates due to overlapping fields, both the pairwise correlations and functional connections decay as a function of the shortest distance between the vertices of the spatial firing pattern of pairs of grid cells, i.e. their phase difference. They take positive values between cells with nearby phases and approach zero or negative values for larger phase differences. We find similar results also when, in addition to correlations due to overlapping fields, we account for correlations due to theta oscillations and head directional inputs. The inferred connections between neurons in the same module and those from different modules can be both negative and positive, with a mean close to zero, but with the strongest inferred connections found between cells of the same module. Taken together, our results suggest that grid cells in the same module do indeed form a local network of interconnected neurons with a functional connectivity that supports a role for attractor dynamics in the generation of grid pattern.
url http://europepmc.org/articles/PMC4340907?pdf=render
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AT mariamørreaunet correlationsandfunctionalconnectionsinapopulationofgridcells
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