MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer

Chemotherapy resistance is a key contributor to the dismal prognoses for lung cancer patients. While the majority of studies have focused on sequence mutations and expression changes in protein-coding genes, recent reports have suggested that microRNA (miRNA) expression changes also play an influent...

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Main Authors: Katey S. S. Enfield, Greg L. Stewart, Larissa A. Pikor, Carlos E. Alvarez, Stephen Lam, Wan L. Lam, Raj Chari
Format: Article
Language:English
Published: Hindawi Limited 2011-01-01
Series:Journal of Biomedicine and Biotechnology
Online Access:http://dx.doi.org/10.1155/2011/474632
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spelling doaj-60970ec3c4894b569e2c7955da91936b2020-11-25T01:38:20ZengHindawi LimitedJournal of Biomedicine and Biotechnology1110-72431110-72512011-01-01201110.1155/2011/474632474632MicroRNA Gene Dosage Alterations and Drug Response in Lung CancerKatey S. S. Enfield0Greg L. Stewart1Larissa A. Pikor2Carlos E. Alvarez3Stephen Lam4Wan L. Lam5Raj Chari6British Columbia Cancer Research Centre, 675 West 10th Avenue, Vancouver, BC, V5Z 1L3, CanadaBritish Columbia Cancer Research Centre, 675 West 10th Avenue, Vancouver, BC, V5Z 1L3, CanadaBritish Columbia Cancer Research Centre, 675 West 10th Avenue, Vancouver, BC, V5Z 1L3, CanadaResearch Institute, Nationwide Children’s Hospital, Columbus, OH 43205-2664, USABritish Columbia Cancer Research Centre, 675 West 10th Avenue, Vancouver, BC, V5Z 1L3, CanadaBritish Columbia Cancer Research Centre, 675 West 10th Avenue, Vancouver, BC, V5Z 1L3, CanadaBritish Columbia Cancer Research Centre, 675 West 10th Avenue, Vancouver, BC, V5Z 1L3, CanadaChemotherapy resistance is a key contributor to the dismal prognoses for lung cancer patients. While the majority of studies have focused on sequence mutations and expression changes in protein-coding genes, recent reports have suggested that microRNA (miRNA) expression changes also play an influential role in chemotherapy response. However, the role of genetic alterations at miRNA loci in the context of chemotherapy response has yet to be investigated. In this study, we demonstrate the application of an integrative, multidimensional approach in order to identify miRNAs that are associated with chemotherapeutic resistance and sensitivity utilizing publicly available drug response, miRNA loci copy number, miRNA expression, and mRNA expression data from independent resources. By instigating a logical stepwise strategy, we have identified specific miRNAs that are associated with resistance to several chemotherapeutic agents and provide a proof of principle demonstration of how these various databases may be exploited to derive relevant pharmacogenomic results.http://dx.doi.org/10.1155/2011/474632
collection DOAJ
language English
format Article
sources DOAJ
author Katey S. S. Enfield
Greg L. Stewart
Larissa A. Pikor
Carlos E. Alvarez
Stephen Lam
Wan L. Lam
Raj Chari
spellingShingle Katey S. S. Enfield
Greg L. Stewart
Larissa A. Pikor
Carlos E. Alvarez
Stephen Lam
Wan L. Lam
Raj Chari
MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer
Journal of Biomedicine and Biotechnology
author_facet Katey S. S. Enfield
Greg L. Stewart
Larissa A. Pikor
Carlos E. Alvarez
Stephen Lam
Wan L. Lam
Raj Chari
author_sort Katey S. S. Enfield
title MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer
title_short MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer
title_full MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer
title_fullStr MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer
title_full_unstemmed MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer
title_sort microrna gene dosage alterations and drug response in lung cancer
publisher Hindawi Limited
series Journal of Biomedicine and Biotechnology
issn 1110-7243
1110-7251
publishDate 2011-01-01
description Chemotherapy resistance is a key contributor to the dismal prognoses for lung cancer patients. While the majority of studies have focused on sequence mutations and expression changes in protein-coding genes, recent reports have suggested that microRNA (miRNA) expression changes also play an influential role in chemotherapy response. However, the role of genetic alterations at miRNA loci in the context of chemotherapy response has yet to be investigated. In this study, we demonstrate the application of an integrative, multidimensional approach in order to identify miRNAs that are associated with chemotherapeutic resistance and sensitivity utilizing publicly available drug response, miRNA loci copy number, miRNA expression, and mRNA expression data from independent resources. By instigating a logical stepwise strategy, we have identified specific miRNAs that are associated with resistance to several chemotherapeutic agents and provide a proof of principle demonstration of how these various databases may be exploited to derive relevant pharmacogenomic results.
url http://dx.doi.org/10.1155/2011/474632
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