The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]

Acne is one of the most common dermatological conditions, but the details of its pathology are unclear, and current management regimens often have adverse effects. Cutibacterium acnes is known as a major acne-associated bacterium that derives energy from lipase-mediated sebum lipid degradation. C. a...

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Main Authors: Hyo Jung Kim, Bong-Jin Lee, Ae-Ran Kwon
Format: Article
Language:English
Published: Elsevier 2020-05-01
Series:Journal of Lipid Research
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S0022227520436211
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spelling doaj-5fe3824233be49dab21618531c68f3b52021-04-29T04:39:12ZengElsevierJournal of Lipid Research0022-22752020-05-01615722733The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]Hyo Jung Kim0Bong-Jin Lee1Ae-Ran Kwon2College of Pharmacy,Woosuk University, Wanju 55338, Republic of Korea; Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Gwanak-gu, Seoul 151-742, Republic of KoreaResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Gwanak-gu, Seoul 151-742, Republic of KoreaTo whom correspondence should be addressed; Department of Beauty Care, College of Medical Science, Deagu Haany University, Gyeongsan 38610, Republic of Korea; To whom correspondence should be addressedAcne is one of the most common dermatological conditions, but the details of its pathology are unclear, and current management regimens often have adverse effects. Cutibacterium acnes is known as a major acne-associated bacterium that derives energy from lipase-mediated sebum lipid degradation. C. acnes is commensal, but lipase activity has been observed to differ among C. acnes types. For example, higher populations of the type IA strains are present in acne lesions with higher lipase activity. In the present study, we examined a conserved lipase in types IB and II that was truncated in type IA C. acnes strains. Closed, blocked, and open structures of C. acnes ATCC11828 lipases were elucidated by X-ray crystallography at 1.6–2.4 Å. The closed crystal structure, which is the most common form in aqueous solution, revealed that a hydrophobic lid domain shields the active site. By comparing closed, blocked, and open structures, we found that the lid domain-opening mechanisms of C. acnes lipases (CAlipases) involve the lid-opening residues, Phe-179 and Phe-211. To the best of our knowledge, this is the first structure-function study of CAlipases, which may help to shed light on the mechanisms involved in acne development and may aid in future drug design.http://www.sciencedirect.com/science/article/pii/S0022227520436211phospholipaseslysophospholipidskin lipid metabolismprotein structureacnelysophosphatidylcholine
collection DOAJ
language English
format Article
sources DOAJ
author Hyo Jung Kim
Bong-Jin Lee
Ae-Ran Kwon
spellingShingle Hyo Jung Kim
Bong-Jin Lee
Ae-Ran Kwon
The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]
Journal of Lipid Research
phospholipases
lysophospholipid
skin lipid metabolism
protein structure
acne
lysophosphatidylcholine
author_facet Hyo Jung Kim
Bong-Jin Lee
Ae-Ran Kwon
author_sort Hyo Jung Kim
title The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]
title_short The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]
title_full The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]
title_fullStr The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]
title_full_unstemmed The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase[S]
title_sort grease trap: uncovering the mechanism of the hydrophobic lid in cutibacterium acnes lipase[s]
publisher Elsevier
series Journal of Lipid Research
issn 0022-2275
publishDate 2020-05-01
description Acne is one of the most common dermatological conditions, but the details of its pathology are unclear, and current management regimens often have adverse effects. Cutibacterium acnes is known as a major acne-associated bacterium that derives energy from lipase-mediated sebum lipid degradation. C. acnes is commensal, but lipase activity has been observed to differ among C. acnes types. For example, higher populations of the type IA strains are present in acne lesions with higher lipase activity. In the present study, we examined a conserved lipase in types IB and II that was truncated in type IA C. acnes strains. Closed, blocked, and open structures of C. acnes ATCC11828 lipases were elucidated by X-ray crystallography at 1.6–2.4 Å. The closed crystal structure, which is the most common form in aqueous solution, revealed that a hydrophobic lid domain shields the active site. By comparing closed, blocked, and open structures, we found that the lid domain-opening mechanisms of C. acnes lipases (CAlipases) involve the lid-opening residues, Phe-179 and Phe-211. To the best of our knowledge, this is the first structure-function study of CAlipases, which may help to shed light on the mechanisms involved in acne development and may aid in future drug design.
topic phospholipases
lysophospholipid
skin lipid metabolism
protein structure
acne
lysophosphatidylcholine
url http://www.sciencedirect.com/science/article/pii/S0022227520436211
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