Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb

Erigeron breviscapus (Vant.) Hand.-Mazz. (Asteraceae) is a species endemic to southwestern China and an important traditional Chinese herb for cardiovascular and cerebral vessel diseases. Applying a modified biotin-streptavidin capture method, 11 microsatellite loci were discovered. Polymorphism of...

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Main Authors: Junbo Yang, Tingshuang Yi, Xiang Li, Kexian Song
Format: Article
Language:English
Published: MDPI AG 2011-10-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/12/10/7265/
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spelling doaj-5efd3c627d5548f686289bdd43559a872020-11-24T21:50:40ZengMDPI AGInternational Journal of Molecular Sciences1422-00672011-10-0112107265727010.3390/ijms12107265Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional HerbJunbo YangTingshuang YiXiang LiKexian SongErigeron breviscapus (Vant.) Hand.-Mazz. (Asteraceae) is a species endemic to southwestern China and an important traditional Chinese herb for cardiovascular and cerebral vessel diseases. Applying a modified biotin-streptavidin capture method, 11 microsatellite loci were discovered. Polymorphism of each locus was assessed in 24 individuals collected from five wild populations. The number of alleles per locus ranged from 2 to 7, with an average of 4.273. The observed (HO) and expected (HE) heterozygosities varied from 0.250 to 0.958 and from 0.337 to 0.786, respectively. Over half of these loci were successfully amplified in two congeneric species. The developed microsatellite markers will be useful for future population genetics and conservation studies, as well as accurate identification of different varieties.http://www.mdpi.com/1422-0067/12/10/7265/Erigeron breviscapusmicrosatellite markerspolymorphismpopulation genetics
collection DOAJ
language English
format Article
sources DOAJ
author Junbo Yang
Tingshuang Yi
Xiang Li
Kexian Song
spellingShingle Junbo Yang
Tingshuang Yi
Xiang Li
Kexian Song
Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
International Journal of Molecular Sciences
Erigeron breviscapus
microsatellite markers
polymorphism
population genetics
author_facet Junbo Yang
Tingshuang Yi
Xiang Li
Kexian Song
author_sort Junbo Yang
title Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
title_short Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
title_full Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
title_fullStr Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
title_full_unstemmed Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
title_sort isolation and characterization of 11 new microsatellite loci in erigeron breviscapus (asteraceae), an important chinese traditional herb
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2011-10-01
description Erigeron breviscapus (Vant.) Hand.-Mazz. (Asteraceae) is a species endemic to southwestern China and an important traditional Chinese herb for cardiovascular and cerebral vessel diseases. Applying a modified biotin-streptavidin capture method, 11 microsatellite loci were discovered. Polymorphism of each locus was assessed in 24 individuals collected from five wild populations. The number of alleles per locus ranged from 2 to 7, with an average of 4.273. The observed (HO) and expected (HE) heterozygosities varied from 0.250 to 0.958 and from 0.337 to 0.786, respectively. Over half of these loci were successfully amplified in two congeneric species. The developed microsatellite markers will be useful for future population genetics and conservation studies, as well as accurate identification of different varieties.
topic Erigeron breviscapus
microsatellite markers
polymorphism
population genetics
url http://www.mdpi.com/1422-0067/12/10/7265/
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AT tingshuangyi isolationandcharacterizationof11newmicrosatellitelociinerigeronbreviscapusasteraceaeanimportantchinesetraditionalherb
AT xiangli isolationandcharacterizationof11newmicrosatellitelociinerigeronbreviscapusasteraceaeanimportantchinesetraditionalherb
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