Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
Erigeron breviscapus (Vant.) Hand.-Mazz. (Asteraceae) is a species endemic to southwestern China and an important traditional Chinese herb for cardiovascular and cerebral vessel diseases. Applying a modified biotin-streptavidin capture method, 11 microsatellite loci were discovered. Polymorphism of...
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doaj-5efd3c627d5548f686289bdd43559a872020-11-24T21:50:40ZengMDPI AGInternational Journal of Molecular Sciences1422-00672011-10-0112107265727010.3390/ijms12107265Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional HerbJunbo YangTingshuang YiXiang LiKexian SongErigeron breviscapus (Vant.) Hand.-Mazz. (Asteraceae) is a species endemic to southwestern China and an important traditional Chinese herb for cardiovascular and cerebral vessel diseases. Applying a modified biotin-streptavidin capture method, 11 microsatellite loci were discovered. Polymorphism of each locus was assessed in 24 individuals collected from five wild populations. The number of alleles per locus ranged from 2 to 7, with an average of 4.273. The observed (HO) and expected (HE) heterozygosities varied from 0.250 to 0.958 and from 0.337 to 0.786, respectively. Over half of these loci were successfully amplified in two congeneric species. The developed microsatellite markers will be useful for future population genetics and conservation studies, as well as accurate identification of different varieties.http://www.mdpi.com/1422-0067/12/10/7265/Erigeron breviscapusmicrosatellite markerspolymorphismpopulation genetics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Junbo Yang Tingshuang Yi Xiang Li Kexian Song |
spellingShingle |
Junbo Yang Tingshuang Yi Xiang Li Kexian Song Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb International Journal of Molecular Sciences Erigeron breviscapus microsatellite markers polymorphism population genetics |
author_facet |
Junbo Yang Tingshuang Yi Xiang Li Kexian Song |
author_sort |
Junbo Yang |
title |
Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb |
title_short |
Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb |
title_full |
Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb |
title_fullStr |
Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb |
title_full_unstemmed |
Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb |
title_sort |
isolation and characterization of 11 new microsatellite loci in erigeron breviscapus (asteraceae), an important chinese traditional herb |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1422-0067 |
publishDate |
2011-10-01 |
description |
Erigeron breviscapus (Vant.) Hand.-Mazz. (Asteraceae) is a species endemic to southwestern China and an important traditional Chinese herb for cardiovascular and cerebral vessel diseases. Applying a modified biotin-streptavidin capture method, 11 microsatellite loci were discovered. Polymorphism of each locus was assessed in 24 individuals collected from five wild populations. The number of alleles per locus ranged from 2 to 7, with an average of 4.273. The observed (HO) and expected (HE) heterozygosities varied from 0.250 to 0.958 and from 0.337 to 0.786, respectively. Over half of these loci were successfully amplified in two congeneric species. The developed microsatellite markers will be useful for future population genetics and conservation studies, as well as accurate identification of different varieties. |
topic |
Erigeron breviscapus microsatellite markers polymorphism population genetics |
url |
http://www.mdpi.com/1422-0067/12/10/7265/ |
work_keys_str_mv |
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