Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive Modeling

A targeted and timely offered treatment can be a benefitting tool for patients with acute promyelocytic leukemia (APML). Current round of study made use of potential morphological and immature fraction–related parameters (cell population data) generated during complete blood cell count (CBC), throug...

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Main Authors: Rana Zeeshan Haider, Ikram Uddin Ujjan, Tahir S. Shamsi
Format: Article
Language:English
Published: Elsevier 2020-01-01
Series:Translational Oncology
Online Access:http://www.sciencedirect.com/science/article/pii/S1936523319303973
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spelling doaj-5dd4735f62184f8d958c695ff6e866682020-11-25T01:29:33ZengElsevierTranslational Oncology1936-52332020-01-011311116Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive ModelingRana Zeeshan Haider0Ikram Uddin Ujjan1Tahir S. Shamsi2Post-graduate Institute of Life Sciences, National Institute of Blood Disease (NIBD), Karachi, Pakistan; International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi, Pakistan; Address all correspondence to: Rana Zeeshan Haider, Post-graduate Institute of Life Sciences, National Institute of Blood Disease (NIBD), ST 2/A, Block 17, Gulshan-e-Iqbal, KDA Scheme 24, Karachi, Pakistan. E-mail:Department of Basic Medical Sciences, Liaqat University of Health and Medical Sciences (LUMHS), Jamshoro, PakistanPost-graduate Institute of Life Sciences, National Institute of Blood Disease (NIBD), Karachi, PakistanA targeted and timely offered treatment can be a benefitting tool for patients with acute promyelocytic leukemia (APML). Current round of study made use of potential morphological and immature fraction–related parameters (cell population data) generated during complete blood cell count (CBC), through artificial neural network (ANN) predictive modeling for early flagging of APML cases. We collected classical CBC items along with cell population data (CPD) from hematology analyzer at diagnosis of 1067 study subjects with hematological neoplasms. For morphological assessment, peripheral blood films were examined. Statistical and machine learning tools including principal component analysis (PCA) helped in the evaluation of predictive capacity of routine and CPD items. Then selected CBC item–driven ANN predictive modeling was developed to smartly use the hidden trend by increasing the auguring accuracy of these parameters in differentiation of APML cases. We found a characteristic triad based on lower (53.73) platelet count (PLT) with decreased/normal (4.72) immature fraction of platelet (IPF) with addition of significantly higher value (65.5) of DNA/RNA content–related neutrophil (NE-SFL) parameter in patients with APML against other hematological neoplasm's groups. On PCA, APML showed exceptionally significant variance for PLT, IPF, and NE-SFL. Through training of ANN predictive modeling, our selected CBC items successfully classify the APML group from non-APML groups at highly significant (0.894) AUC value with lower (2.3 percent) false prediction rate. Practical results of using our ANN model were found acceptable with value of 95.7% and 97.7% for training and testing data sets, respectively. We proposed that PLT, IPF, and NE-SFL could potentially be used for early flagging of APML cases in the hematology-oncology unit. CBC item–driven ANN modeling is a novel approach that substantially strengthen the predictive potential of CBC items, allowing the clinicians to be confident by the typical trend raised by these studied parameters.http://www.sciencedirect.com/science/article/pii/S1936523319303973
collection DOAJ
language English
format Article
sources DOAJ
author Rana Zeeshan Haider
Ikram Uddin Ujjan
Tahir S. Shamsi
spellingShingle Rana Zeeshan Haider
Ikram Uddin Ujjan
Tahir S. Shamsi
Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive Modeling
Translational Oncology
author_facet Rana Zeeshan Haider
Ikram Uddin Ujjan
Tahir S. Shamsi
author_sort Rana Zeeshan Haider
title Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive Modeling
title_short Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive Modeling
title_full Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive Modeling
title_fullStr Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive Modeling
title_full_unstemmed Cell Population Data–Driven Acute Promyelocytic Leukemia Flagging Through Artificial Neural Network Predictive Modeling
title_sort cell population data–driven acute promyelocytic leukemia flagging through artificial neural network predictive modeling
publisher Elsevier
series Translational Oncology
issn 1936-5233
publishDate 2020-01-01
description A targeted and timely offered treatment can be a benefitting tool for patients with acute promyelocytic leukemia (APML). Current round of study made use of potential morphological and immature fraction–related parameters (cell population data) generated during complete blood cell count (CBC), through artificial neural network (ANN) predictive modeling for early flagging of APML cases. We collected classical CBC items along with cell population data (CPD) from hematology analyzer at diagnosis of 1067 study subjects with hematological neoplasms. For morphological assessment, peripheral blood films were examined. Statistical and machine learning tools including principal component analysis (PCA) helped in the evaluation of predictive capacity of routine and CPD items. Then selected CBC item–driven ANN predictive modeling was developed to smartly use the hidden trend by increasing the auguring accuracy of these parameters in differentiation of APML cases. We found a characteristic triad based on lower (53.73) platelet count (PLT) with decreased/normal (4.72) immature fraction of platelet (IPF) with addition of significantly higher value (65.5) of DNA/RNA content–related neutrophil (NE-SFL) parameter in patients with APML against other hematological neoplasm's groups. On PCA, APML showed exceptionally significant variance for PLT, IPF, and NE-SFL. Through training of ANN predictive modeling, our selected CBC items successfully classify the APML group from non-APML groups at highly significant (0.894) AUC value with lower (2.3 percent) false prediction rate. Practical results of using our ANN model were found acceptable with value of 95.7% and 97.7% for training and testing data sets, respectively. We proposed that PLT, IPF, and NE-SFL could potentially be used for early flagging of APML cases in the hematology-oncology unit. CBC item–driven ANN modeling is a novel approach that substantially strengthen the predictive potential of CBC items, allowing the clinicians to be confident by the typical trend raised by these studied parameters.
url http://www.sciencedirect.com/science/article/pii/S1936523319303973
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