Towards Understanding the Pathogenicity of DROSHA Mutations in Oncohematology
Myelodysplastic syndrome (MDS) refers to a heterogeneous group of closely related clonal hematopoietic disorders, which are characterized by accumulation of somatic mutations. The acquired mutation burden is suggested to define the pathway and consequent phenotype of the pathology. Recent studies ha...
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doaj-5cef63c545ec4c59a1a4445c3454ca462021-09-25T23:52:45ZengMDPI AGCells2073-44092021-09-01102357235710.3390/cells10092357Towards Understanding the Pathogenicity of DROSHA Mutations in OncohematologyDmitrii S. Bug0Artem V. Tishkov1Ivan S. Moiseev2Yuri B. Porozov3Natalia V. Petukhova4Bioinformatics Research Center, Pavlov First Saint Petersburg Medical State University, 197022 St. Petersburg, RussiaBioinformatics Research Center, Pavlov First Saint Petersburg Medical State University, 197022 St. Petersburg, RussiaR.M. Gorbacheva Scientific Research Institute of Pediatric Hematology and Transplantation, Pavlov First Saint Petersburg State Medical University, 197022 St. Petersburg, RussiaWorld-Class Research Center “Digital Biodesign and Personalized Healthcare”, I.M. Sechenov First Moscow State Medical University, 119991 Moscow, RussiaBioinformatics Research Center, Pavlov First Saint Petersburg Medical State University, 197022 St. Petersburg, RussiaMyelodysplastic syndrome (MDS) refers to a heterogeneous group of closely related clonal hematopoietic disorders, which are characterized by accumulation of somatic mutations. The acquired mutation burden is suggested to define the pathway and consequent phenotype of the pathology. Recent studies have called attention to the role of miRNA biogenesis genes in MDS progression; in particular, the mutational pressure of the <i>DROSHA</i> gene was determined. Therefore, this highlights the importance of studying the impact of all collected missense mutations found within the <i>DROSHA</i> gene in oncohematology that might affect the functionality of the protein. In this study, the selected mutations were extensively examined by computational screening, and the most deleterious were subjected to a further molecular dynamic simulation in order to uncover the molecular mechanism of the structural damage to the protein altering its biological function. The most significant effect was found for variants I625K, L1047S, and H1170D, presumably affecting the endonuclease activity of DROSHA. Such alterations arisen during MDS progression should be taken into consideration as evoking certain clinical traits in the malignifying clonal evolution.https://www.mdpi.com/2073-4409/10/9/2357DROSHAmyelodysplastic syndromevariants effect predictionprotein modelingmolecular dynamics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Dmitrii S. Bug Artem V. Tishkov Ivan S. Moiseev Yuri B. Porozov Natalia V. Petukhova |
spellingShingle |
Dmitrii S. Bug Artem V. Tishkov Ivan S. Moiseev Yuri B. Porozov Natalia V. Petukhova Towards Understanding the Pathogenicity of DROSHA Mutations in Oncohematology Cells DROSHA myelodysplastic syndrome variants effect prediction protein modeling molecular dynamics |
author_facet |
Dmitrii S. Bug Artem V. Tishkov Ivan S. Moiseev Yuri B. Porozov Natalia V. Petukhova |
author_sort |
Dmitrii S. Bug |
title |
Towards Understanding the Pathogenicity of DROSHA Mutations in Oncohematology |
title_short |
Towards Understanding the Pathogenicity of DROSHA Mutations in Oncohematology |
title_full |
Towards Understanding the Pathogenicity of DROSHA Mutations in Oncohematology |
title_fullStr |
Towards Understanding the Pathogenicity of DROSHA Mutations in Oncohematology |
title_full_unstemmed |
Towards Understanding the Pathogenicity of DROSHA Mutations in Oncohematology |
title_sort |
towards understanding the pathogenicity of drosha mutations in oncohematology |
publisher |
MDPI AG |
series |
Cells |
issn |
2073-4409 |
publishDate |
2021-09-01 |
description |
Myelodysplastic syndrome (MDS) refers to a heterogeneous group of closely related clonal hematopoietic disorders, which are characterized by accumulation of somatic mutations. The acquired mutation burden is suggested to define the pathway and consequent phenotype of the pathology. Recent studies have called attention to the role of miRNA biogenesis genes in MDS progression; in particular, the mutational pressure of the <i>DROSHA</i> gene was determined. Therefore, this highlights the importance of studying the impact of all collected missense mutations found within the <i>DROSHA</i> gene in oncohematology that might affect the functionality of the protein. In this study, the selected mutations were extensively examined by computational screening, and the most deleterious were subjected to a further molecular dynamic simulation in order to uncover the molecular mechanism of the structural damage to the protein altering its biological function. The most significant effect was found for variants I625K, L1047S, and H1170D, presumably affecting the endonuclease activity of DROSHA. Such alterations arisen during MDS progression should be taken into consideration as evoking certain clinical traits in the malignifying clonal evolution. |
topic |
DROSHA myelodysplastic syndrome variants effect prediction protein modeling molecular dynamics |
url |
https://www.mdpi.com/2073-4409/10/9/2357 |
work_keys_str_mv |
AT dmitriisbug towardsunderstandingthepathogenicityofdroshamutationsinoncohematology AT artemvtishkov towardsunderstandingthepathogenicityofdroshamutationsinoncohematology AT ivansmoiseev towardsunderstandingthepathogenicityofdroshamutationsinoncohematology AT yuribporozov towardsunderstandingthepathogenicityofdroshamutationsinoncohematology AT nataliavpetukhova towardsunderstandingthepathogenicityofdroshamutationsinoncohematology |
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1717367660553961472 |