Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma Subjects

Introduction: Oral Squamous Cell Carcinoma (OSCC) is the sixth most common cancer in the world and is of significant public health importance. There is a clear evidence of rise in the prevalence rate of oropharyngeal cancers mostly located at the base of the tongue and tonsillar region, which is att...

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Main Authors: Pushkal Sinduvadi Ramesh, Devananda Devegowda, Pundalik Rama Naik, Prathibha, Parveen Doddamani, Suma M Nataraj
Format: Article
Language:English
Published: JCDR Research and Publications Private Limited 2018-07-01
Series:Journal of Clinical and Diagnostic Research
Subjects:
Online Access:https://jcdr.net/articles/PDF/11806/34880_CE[Ra]_F(Sh)_PF1(AGAK)_PFA(AK)_PB(AG_AnG)_PN(AnG).pdf
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spelling doaj-5c1cc4d88d1b42fba4193bba15af288c2020-11-25T02:01:46ZengJCDR Research and Publications Private LimitedJournal of Clinical and Diagnostic Research2249-782X0973-709X2018-07-01127BC22BC2510.7860/JCDR/2018/34880.11806Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma SubjectsPushkal Sinduvadi Ramesh0Devananda Devegowda1Pundalik Rama Naik2Prathibha3Parveen Doddamani4Suma M Nataraj5PhD Scholar, Department of Biochemistry, JSS Medical College, JSS University, Mysuru, Karnataka, India.Assistant Professor, Department of Biochemistry, JSS Medical College, JSS University, Mysuru, Karnataka, India.PG Student, Department of Biochemistry, JSS Medical College, JSS University, Mysuru, Karnataka, India.PG Student, Department of Biochemistry, JSS Medical College, JSS University, Mysuru, Karnataka, India.Assistant Professor, Department of Biochemistry, JSS Medical College, JSS University, Mysuru, Karnataka, India.Professor, Department of Biochemistry, JSS Medical College, JSS University, Mysuru, Karnataka, India.Introduction: Oral Squamous Cell Carcinoma (OSCC) is the sixth most common cancer in the world and is of significant public health importance. There is a clear evidence of rise in the prevalence rate of oropharyngeal cancers mostly located at the base of the tongue and tonsillar region, which is attributed to the augmented incidence of high risk Human Papilloma Viruses (HPV) infections and requires a routine screening tool. Aim: To detect and genotype HPV in the saliva of OSCC subjects using nested Polymerase Chain Reaction (PCR). Materials and Methods: Saliva rinse of 30 OSCC patients from JSS Dental College Hospital and Bharath Hospital & Institute of Oncology and 30 each from normal and high risk individuals from different regions of Mysore were collected and nested PCR based high-risk HPV genotyping was carried out. Results: Using consensus PCR primers it was observed that 13.3% of normal subjects, 46.6% of high risk subjects and 43.3% of OSCC subjects were infected with HPV irrespective of specific type. In all the three groups the prevalence of HPV 16 was significantly higher than HPV 18. The odds ratio for high risk subjects to be HPV positive was found to be 5.68 (p= 0.007*) and for OSCC subjects to be HPV positive was 4.97 (p= 0.01*). Conclusion: Our study has emphasised, the fact that utilisation of saliva sample as a non-invasive tool in screening of HPV associated oropharyngeal cancers can be more patient friendly without compromising on the detection ability.https://jcdr.net/articles/PDF/11806/34880_CE[Ra]_F(Sh)_PF1(AGAK)_PFA(AK)_PB(AG_AnG)_PN(AnG).pdfhpv genotypingpgmy09/pgmy11 primersgp5+/gp6+ primersnon-invasive
collection DOAJ
language English
format Article
sources DOAJ
author Pushkal Sinduvadi Ramesh
Devananda Devegowda
Pundalik Rama Naik
Prathibha
Parveen Doddamani
Suma M Nataraj
spellingShingle Pushkal Sinduvadi Ramesh
Devananda Devegowda
Pundalik Rama Naik
Prathibha
Parveen Doddamani
Suma M Nataraj
Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma Subjects
Journal of Clinical and Diagnostic Research
hpv genotyping
pgmy09/pgmy11 primers
gp5+/gp6+ primers
non-invasive
author_facet Pushkal Sinduvadi Ramesh
Devananda Devegowda
Pundalik Rama Naik
Prathibha
Parveen Doddamani
Suma M Nataraj
author_sort Pushkal Sinduvadi Ramesh
title Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma Subjects
title_short Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma Subjects
title_full Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma Subjects
title_fullStr Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma Subjects
title_full_unstemmed Evaluating the Feasibility of Nested PCR as a Screening Tool to Detect HPV Infection in Saliva of Oral Squamous Cell Carcinoma Subjects
title_sort evaluating the feasibility of nested pcr as a screening tool to detect hpv infection in saliva of oral squamous cell carcinoma subjects
publisher JCDR Research and Publications Private Limited
series Journal of Clinical and Diagnostic Research
issn 2249-782X
0973-709X
publishDate 2018-07-01
description Introduction: Oral Squamous Cell Carcinoma (OSCC) is the sixth most common cancer in the world and is of significant public health importance. There is a clear evidence of rise in the prevalence rate of oropharyngeal cancers mostly located at the base of the tongue and tonsillar region, which is attributed to the augmented incidence of high risk Human Papilloma Viruses (HPV) infections and requires a routine screening tool. Aim: To detect and genotype HPV in the saliva of OSCC subjects using nested Polymerase Chain Reaction (PCR). Materials and Methods: Saliva rinse of 30 OSCC patients from JSS Dental College Hospital and Bharath Hospital & Institute of Oncology and 30 each from normal and high risk individuals from different regions of Mysore were collected and nested PCR based high-risk HPV genotyping was carried out. Results: Using consensus PCR primers it was observed that 13.3% of normal subjects, 46.6% of high risk subjects and 43.3% of OSCC subjects were infected with HPV irrespective of specific type. In all the three groups the prevalence of HPV 16 was significantly higher than HPV 18. The odds ratio for high risk subjects to be HPV positive was found to be 5.68 (p= 0.007*) and for OSCC subjects to be HPV positive was 4.97 (p= 0.01*). Conclusion: Our study has emphasised, the fact that utilisation of saliva sample as a non-invasive tool in screening of HPV associated oropharyngeal cancers can be more patient friendly without compromising on the detection ability.
topic hpv genotyping
pgmy09/pgmy11 primers
gp5+/gp6+ primers
non-invasive
url https://jcdr.net/articles/PDF/11806/34880_CE[Ra]_F(Sh)_PF1(AGAK)_PFA(AK)_PB(AG_AnG)_PN(AnG).pdf
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