Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning Classifiers

Globally, grassland biomes form one of the largest terrestrial covers and present critical social–ecological benefits. In Kenya, Arid and Semi-arid Lands (ASAL) occupy 80% of the landscape and are critical for the livelihoods of millions of pastoralists. However, they have been invaded by Invasive P...

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Main Authors: James M. Muthoka, Edward E. Salakpi, Edward Ouko, Zhuang-Fang Yi, Alexander S. Antonarakis, Pedram Rowhani
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Remote Sensing
Subjects:
Online Access:https://www.mdpi.com/2072-4292/13/8/1494
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spelling doaj-5af262f0e53e4479aa28807aa54f31502021-04-13T23:04:34ZengMDPI AGRemote Sensing2072-42922021-04-01131494149410.3390/rs13081494Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning ClassifiersJames M. Muthoka0Edward E. Salakpi1Edward Ouko2Zhuang-Fang Yi3Alexander S. Antonarakis4Pedram Rowhani5Department of Geography, University of Sussex, Brighton BN1 9QJ, UKDepartment of Physics and Astronomy, University of Sussex, Brighton BN1 9QH, UKRegional Centre for Mapping of Resources for Development Technical Services, Nairobi 00618, KenyaDevelopment Seed, Washington, DC 20001, USADepartment of Geography, University of Sussex, Brighton BN1 9QJ, UKDepartment of Geography, University of Sussex, Brighton BN1 9QJ, UKGlobally, grassland biomes form one of the largest terrestrial covers and present critical social–ecological benefits. In Kenya, Arid and Semi-arid Lands (ASAL) occupy 80% of the landscape and are critical for the livelihoods of millions of pastoralists. However, they have been invaded by Invasive Plant Species (IPS) thereby compromising their ecosystem functionality. <i>Opuntia stricta</i>, a well-known IPS, has invaded the ASAL in Kenya and poses a threat to pastoralism, leading to livestock mortality and land degradation. Thus, identification and detailed estimation of its cover is essential for drawing an effective management strategy. The study aimed at utilizing the Sentinel-2 multispectral sensor to detect <i>Opuntia stricta</i> in a heterogeneous ASAL in Laikipia County, using ensemble machine learning classifiers. To illustrate the potential of Sentinel-2, the detection of <i>Opuntia stricta</i> was based on only the spectral bands as well as in combination with vegetation and topographic indices using Extreme Gradient Boost (XGBoost) and Random Forest (RF) classifiers to detect the abundance. Study results showed that the overall accuracies of Sentinel 2 spectral bands were 80% and 84.4%, while that of combined spectral bands, vegetation, and topographic indices was 89.2% and 92.4% for XGBoost and RF classifiers, respectively. The inclusion of topographic indices that enhance characterization of biological processes, and vegetation indices that minimize the influence of soil and the effects of atmosphere, contributed by improving the accuracy of the classification. Qualitatively, <i>Opuntia stricta</i> spatially was found along river banks, flood plains, and near settlements but limited in forested areas. Our results demonstrated the potential of Sentinel-2 multispectral sensors to effectively detect and map <i>Opuntia stricta</i> in a complex heterogeneous ASAL, which can support conservation and rangeland management policies that aim to map and list threatened areas, and conserve the biodiversity and productivity of rangeland ecosystems.https://www.mdpi.com/2072-4292/13/8/1494invasive plant speciesremote sensingextreme gradient boostrandom forestspectral indicestopographic indices
collection DOAJ
language English
format Article
sources DOAJ
author James M. Muthoka
Edward E. Salakpi
Edward Ouko
Zhuang-Fang Yi
Alexander S. Antonarakis
Pedram Rowhani
spellingShingle James M. Muthoka
Edward E. Salakpi
Edward Ouko
Zhuang-Fang Yi
Alexander S. Antonarakis
Pedram Rowhani
Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning Classifiers
Remote Sensing
invasive plant species
remote sensing
extreme gradient boost
random forest
spectral indices
topographic indices
author_facet James M. Muthoka
Edward E. Salakpi
Edward Ouko
Zhuang-Fang Yi
Alexander S. Antonarakis
Pedram Rowhani
author_sort James M. Muthoka
title Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning Classifiers
title_short Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning Classifiers
title_full Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning Classifiers
title_fullStr Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning Classifiers
title_full_unstemmed Mapping <i>Opuntia stricta</i> in the Arid and Semi-Arid Environment of Kenya Using Sentinel-2 Imagery and Ensemble Machine Learning Classifiers
title_sort mapping <i>opuntia stricta</i> in the arid and semi-arid environment of kenya using sentinel-2 imagery and ensemble machine learning classifiers
publisher MDPI AG
series Remote Sensing
issn 2072-4292
publishDate 2021-04-01
description Globally, grassland biomes form one of the largest terrestrial covers and present critical social–ecological benefits. In Kenya, Arid and Semi-arid Lands (ASAL) occupy 80% of the landscape and are critical for the livelihoods of millions of pastoralists. However, they have been invaded by Invasive Plant Species (IPS) thereby compromising their ecosystem functionality. <i>Opuntia stricta</i>, a well-known IPS, has invaded the ASAL in Kenya and poses a threat to pastoralism, leading to livestock mortality and land degradation. Thus, identification and detailed estimation of its cover is essential for drawing an effective management strategy. The study aimed at utilizing the Sentinel-2 multispectral sensor to detect <i>Opuntia stricta</i> in a heterogeneous ASAL in Laikipia County, using ensemble machine learning classifiers. To illustrate the potential of Sentinel-2, the detection of <i>Opuntia stricta</i> was based on only the spectral bands as well as in combination with vegetation and topographic indices using Extreme Gradient Boost (XGBoost) and Random Forest (RF) classifiers to detect the abundance. Study results showed that the overall accuracies of Sentinel 2 spectral bands were 80% and 84.4%, while that of combined spectral bands, vegetation, and topographic indices was 89.2% and 92.4% for XGBoost and RF classifiers, respectively. The inclusion of topographic indices that enhance characterization of biological processes, and vegetation indices that minimize the influence of soil and the effects of atmosphere, contributed by improving the accuracy of the classification. Qualitatively, <i>Opuntia stricta</i> spatially was found along river banks, flood plains, and near settlements but limited in forested areas. Our results demonstrated the potential of Sentinel-2 multispectral sensors to effectively detect and map <i>Opuntia stricta</i> in a complex heterogeneous ASAL, which can support conservation and rangeland management policies that aim to map and list threatened areas, and conserve the biodiversity and productivity of rangeland ecosystems.
topic invasive plant species
remote sensing
extreme gradient boost
random forest
spectral indices
topographic indices
url https://www.mdpi.com/2072-4292/13/8/1494
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