Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential

Abstract Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieba...

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Main Authors: Cátia Pinto, Susana Sousa, Hugo Froufe, Conceição Egas, Christophe Clément, Florence Fontaine, Ana C Gomes
Format: Article
Language:English
Published: BMC 2018-11-01
Series:Standards in Genomic Sciences
Subjects:
Online Access:http://link.springer.com/article/10.1186/s40793-018-0327-x
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spelling doaj-5a9584fa5c324529b59ad59885fcadba2020-11-25T01:46:31ZengBMCStandards in Genomic Sciences1944-32772018-11-0113111210.1186/s40793-018-0327-xDraft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potentialCátia Pinto0Susana Sousa1Hugo Froufe2Conceição Egas3Christophe Clément4Florence Fontaine5Ana C Gomes6Biocant - Biotechnology Innovation CenterBiocant - Biotechnology Innovation CenterBiocant - Biotechnology Innovation CenterBiocant - Biotechnology Innovation CenterSFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP)- EA 4707SFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP)- EA 4707Biocant - Biotechnology Innovation CenterAbstract Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD disease. Herein we report the draft genome sequence of B. amyloliquefaciens subsp. plantarum Fito_F321, isolated from the leaf of Vitis vinifera cv. Merlot at Bairrada appellation (Cantanhede, Portugal). The genome size is 3,856,229 bp, with a GC content of 46.54% that contains 3697 protein-coding genes, 86 tRNA coding genes and 5 rRNA genes. The draft genome of strain Fito_F321 allowed to predict a set of bioactive compounds as bacillaene, difficidin, macrolactin, surfactin and fengycin that due to their antimicrobial activity are hypothesized to be of utmost importance for biocontrol of grapevine diseases.http://link.springer.com/article/10.1186/s40793-018-0327-xGenome sequencingBacillus amyloliquefaciens subsp. plantarumFito_F321 strainGrapevine-associated microorganismBiocontrolEndophytic microorganism
collection DOAJ
language English
format Article
sources DOAJ
author Cátia Pinto
Susana Sousa
Hugo Froufe
Conceição Egas
Christophe Clément
Florence Fontaine
Ana C Gomes
spellingShingle Cátia Pinto
Susana Sousa
Hugo Froufe
Conceição Egas
Christophe Clément
Florence Fontaine
Ana C Gomes
Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
Standards in Genomic Sciences
Genome sequencing
Bacillus amyloliquefaciens subsp. plantarum
Fito_F321 strain
Grapevine-associated microorganism
Biocontrol
Endophytic microorganism
author_facet Cátia Pinto
Susana Sousa
Hugo Froufe
Conceição Egas
Christophe Clément
Florence Fontaine
Ana C Gomes
author_sort Cátia Pinto
title Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_short Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_full Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_fullStr Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_full_unstemmed Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
title_sort draft genome sequence of bacillus amyloliquefaciens subsp. plantarum strain fito_f321, an endophyte microorganism from vitis vinifera with biocontrol potential
publisher BMC
series Standards in Genomic Sciences
issn 1944-3277
publishDate 2018-11-01
description Abstract Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD disease. Herein we report the draft genome sequence of B. amyloliquefaciens subsp. plantarum Fito_F321, isolated from the leaf of Vitis vinifera cv. Merlot at Bairrada appellation (Cantanhede, Portugal). The genome size is 3,856,229 bp, with a GC content of 46.54% that contains 3697 protein-coding genes, 86 tRNA coding genes and 5 rRNA genes. The draft genome of strain Fito_F321 allowed to predict a set of bioactive compounds as bacillaene, difficidin, macrolactin, surfactin and fengycin that due to their antimicrobial activity are hypothesized to be of utmost importance for biocontrol of grapevine diseases.
topic Genome sequencing
Bacillus amyloliquefaciens subsp. plantarum
Fito_F321 strain
Grapevine-associated microorganism
Biocontrol
Endophytic microorganism
url http://link.springer.com/article/10.1186/s40793-018-0327-x
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