Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential
Abstract Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieba...
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doaj-5a9584fa5c324529b59ad59885fcadba2020-11-25T01:46:31ZengBMCStandards in Genomic Sciences1944-32772018-11-0113111210.1186/s40793-018-0327-xDraft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potentialCátia Pinto0Susana Sousa1Hugo Froufe2Conceição Egas3Christophe Clément4Florence Fontaine5Ana C Gomes6Biocant - Biotechnology Innovation CenterBiocant - Biotechnology Innovation CenterBiocant - Biotechnology Innovation CenterBiocant - Biotechnology Innovation CenterSFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP)- EA 4707SFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP)- EA 4707Biocant - Biotechnology Innovation CenterAbstract Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD disease. Herein we report the draft genome sequence of B. amyloliquefaciens subsp. plantarum Fito_F321, isolated from the leaf of Vitis vinifera cv. Merlot at Bairrada appellation (Cantanhede, Portugal). The genome size is 3,856,229 bp, with a GC content of 46.54% that contains 3697 protein-coding genes, 86 tRNA coding genes and 5 rRNA genes. The draft genome of strain Fito_F321 allowed to predict a set of bioactive compounds as bacillaene, difficidin, macrolactin, surfactin and fengycin that due to their antimicrobial activity are hypothesized to be of utmost importance for biocontrol of grapevine diseases.http://link.springer.com/article/10.1186/s40793-018-0327-xGenome sequencingBacillus amyloliquefaciens subsp. plantarumFito_F321 strainGrapevine-associated microorganismBiocontrolEndophytic microorganism |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Cátia Pinto Susana Sousa Hugo Froufe Conceição Egas Christophe Clément Florence Fontaine Ana C Gomes |
spellingShingle |
Cátia Pinto Susana Sousa Hugo Froufe Conceição Egas Christophe Clément Florence Fontaine Ana C Gomes Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential Standards in Genomic Sciences Genome sequencing Bacillus amyloliquefaciens subsp. plantarum Fito_F321 strain Grapevine-associated microorganism Biocontrol Endophytic microorganism |
author_facet |
Cátia Pinto Susana Sousa Hugo Froufe Conceição Egas Christophe Clément Florence Fontaine Ana C Gomes |
author_sort |
Cátia Pinto |
title |
Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential |
title_short |
Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential |
title_full |
Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential |
title_fullStr |
Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential |
title_full_unstemmed |
Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential |
title_sort |
draft genome sequence of bacillus amyloliquefaciens subsp. plantarum strain fito_f321, an endophyte microorganism from vitis vinifera with biocontrol potential |
publisher |
BMC |
series |
Standards in Genomic Sciences |
issn |
1944-3277 |
publishDate |
2018-11-01 |
description |
Abstract Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321 is a naturally occurring strain in vineyard, with the ability to colonise grapevine and which unveils a naturally antagonistic potential against phytopathogens of grapevine, including those responsible for the Botryosphaeria dieback, a GTD disease. Herein we report the draft genome sequence of B. amyloliquefaciens subsp. plantarum Fito_F321, isolated from the leaf of Vitis vinifera cv. Merlot at Bairrada appellation (Cantanhede, Portugal). The genome size is 3,856,229 bp, with a GC content of 46.54% that contains 3697 protein-coding genes, 86 tRNA coding genes and 5 rRNA genes. The draft genome of strain Fito_F321 allowed to predict a set of bioactive compounds as bacillaene, difficidin, macrolactin, surfactin and fengycin that due to their antimicrobial activity are hypothesized to be of utmost importance for biocontrol of grapevine diseases. |
topic |
Genome sequencing Bacillus amyloliquefaciens subsp. plantarum Fito_F321 strain Grapevine-associated microorganism Biocontrol Endophytic microorganism |
url |
http://link.springer.com/article/10.1186/s40793-018-0327-x |
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