Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis

Abstract Background The deficiency of vitamin D receptor (VDR) or its ligand, vitamin D3, is linked to the development of renal diseases. The TaqI (rs731236) and ApaI (rs7975232) polymorphisms of VDR gene are widely studied for their association with renal disease risk. However, studies have largely...

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Main Authors: Tajamul Hussain, Shaik M. Naushad, Anwar Ahmed, Salman Alamery, Arif A. Mohammed, Mohamed O. Abdelkader, Nasser Abobakr Nasser Alkhrm
Format: Article
Language:English
Published: BMC 2019-12-01
Series:BMC Medical Genetics
Subjects:
Online Access:https://doi.org/10.1186/s12881-019-0932-6
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spelling doaj-5a305fbd9d3a4071bb43ec974389b26b2021-04-02T18:56:35ZengBMCBMC Medical Genetics1471-23502019-12-012011810.1186/s12881-019-0932-6Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysisTajamul Hussain0Shaik M. Naushad1Anwar Ahmed2Salman Alamery3Arif A. Mohammed4Mohamed O. Abdelkader5Nasser Abobakr Nasser Alkhrm6Center of Excellence in Biotechnology Research, Department of Biochemistry, College of Science Building 5, King Saud UniversityBiochemical Genetics, Sandor Life Sciences Pvt. LtdCenter of Excellence in Biotechnology Research, Department of Biochemistry, College of Science Building 5, King Saud UniversityCenter of Excellence in Biotechnology Research, Department of Biochemistry, College of Science Building 5, King Saud UniversityCenter of Excellence in Biotechnology Research, Department of Biochemistry, College of Science Building 5, King Saud UniversityDepartment of Biochemistry, College of Science, King Saud UniversityDepartment of Biochemistry, College of Science, King Saud UniversityAbstract Background The deficiency of vitamin D receptor (VDR) or its ligand, vitamin D3, is linked to the development of renal diseases. The TaqI (rs731236) and ApaI (rs7975232) polymorphisms of VDR gene are widely studied for their association with renal disease risk. However, studies have largely been ambiguous. Methods Meta-analysis was carried out to clarify the association of TaqI (2777 cases and 3522 controls) and ApaI (2440 cases and 3279 controls) polymorphisms with nephrolithiasis (NL), diabetic nephropathy (DN) and end stage renal disease (ESRD). Results The VDR TaqI C-allele under allele contrast was significantly associated with ESRD in both fixed effect and random effect models, and ApaI C-allele with ESRD only under fixed effect model. Cochrane Q-test showed no evidence of heterogeneity for TaqI polymorphism and a significant heterogeneity for Apa I polymorphism. No publication bias was observed for both the polymorphisms. Conclusions The present meta-analysis identifies TaqI and ApaI polymorphisms of VDR gene as risk factors for renal diseases.https://doi.org/10.1186/s12881-019-0932-6Vitamin D receptor gene polymorphismEnd stage renal diseaseNephrolithiasisDiabetic nephropathyMeta-analysis
collection DOAJ
language English
format Article
sources DOAJ
author Tajamul Hussain
Shaik M. Naushad
Anwar Ahmed
Salman Alamery
Arif A. Mohammed
Mohamed O. Abdelkader
Nasser Abobakr Nasser Alkhrm
spellingShingle Tajamul Hussain
Shaik M. Naushad
Anwar Ahmed
Salman Alamery
Arif A. Mohammed
Mohamed O. Abdelkader
Nasser Abobakr Nasser Alkhrm
Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis
BMC Medical Genetics
Vitamin D receptor gene polymorphism
End stage renal disease
Nephrolithiasis
Diabetic nephropathy
Meta-analysis
author_facet Tajamul Hussain
Shaik M. Naushad
Anwar Ahmed
Salman Alamery
Arif A. Mohammed
Mohamed O. Abdelkader
Nasser Abobakr Nasser Alkhrm
author_sort Tajamul Hussain
title Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis
title_short Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis
title_full Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis
title_fullStr Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis
title_full_unstemmed Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis
title_sort association of vitamin d receptor taqi and apai genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis
publisher BMC
series BMC Medical Genetics
issn 1471-2350
publishDate 2019-12-01
description Abstract Background The deficiency of vitamin D receptor (VDR) or its ligand, vitamin D3, is linked to the development of renal diseases. The TaqI (rs731236) and ApaI (rs7975232) polymorphisms of VDR gene are widely studied for their association with renal disease risk. However, studies have largely been ambiguous. Methods Meta-analysis was carried out to clarify the association of TaqI (2777 cases and 3522 controls) and ApaI (2440 cases and 3279 controls) polymorphisms with nephrolithiasis (NL), diabetic nephropathy (DN) and end stage renal disease (ESRD). Results The VDR TaqI C-allele under allele contrast was significantly associated with ESRD in both fixed effect and random effect models, and ApaI C-allele with ESRD only under fixed effect model. Cochrane Q-test showed no evidence of heterogeneity for TaqI polymorphism and a significant heterogeneity for Apa I polymorphism. No publication bias was observed for both the polymorphisms. Conclusions The present meta-analysis identifies TaqI and ApaI polymorphisms of VDR gene as risk factors for renal diseases.
topic Vitamin D receptor gene polymorphism
End stage renal disease
Nephrolithiasis
Diabetic nephropathy
Meta-analysis
url https://doi.org/10.1186/s12881-019-0932-6
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