| Summary: | How species are distributed on Earth depends largely on climate factors. Whenever these environmental conditions change, species tend to shift their distributions to reach more favourable conditions. Distinct sets of species similarly distributed (i.e., chorotypes) occur in biogeographical regions with homogeneous environmental conditions. Here, we analysed whether biogeographical regions are unstable over time (from the past to the future). We modelled the realised niche of amphibians and reptiles in the Iberian Peninsula in the present, and several past and future climate scenarios. Then, we used Jaccard’s index and the unweighted pair group method (UPGMA) to define the biogeographical regions. Our results suggest that the biogeographical regions of Iberian amphibians and reptiles changed greatly over time, due to the climatic changes between periods. Biogeographical regions composed of species with Atlantic affinities changed particularly, overall gaining suitable areas in past colder periods and losing suitable areas in warmer periods. The areas of refugia for amphibians over time corresponded to the most humid regions (north-west of the peninsula), while the most important areas for reptiles occur in the south and on the Atlantic coast. The identification of biogeographical patterns considering past climate changes is essential to better apply conservation measures.
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