The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scans

Abstract Background Medical imaging plays an important role in determining the progression of joint damage in rheumatoid arthritis (RA). High resolution peripheral quantitative computed tomography (HR-pQCT) is a sensitive tool capable of evaluating bone microarchitecture and erosions, and 3D rigid i...

Full description

Bibliographic Details
Main Authors: Scott C. Brunet, Michael T. Kuczynski, Jennifer L. Bhatla, Sophie Lemay, Yves Pauchard, Peter Salat, Cheryl Barnabe, Sarah L. Manske
Format: Article
Language:English
Published: BMC 2020-04-01
Series:BMC Medical Imaging
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12880-020-00437-8
id doaj-5997fcd73a70420882631bad6bf654fb
record_format Article
spelling doaj-5997fcd73a70420882631bad6bf654fb2020-11-25T02:02:55ZengBMCBMC Medical Imaging1471-23422020-04-0120111010.1186/s12880-020-00437-8The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scansScott C. Brunet0Michael T. Kuczynski1Jennifer L. Bhatla2Sophie Lemay3Yves Pauchard4Peter Salat5Cheryl Barnabe6Sarah L. Manske7Department of Radiology, Cumming School of Medicine, University of CalgaryDepartment of Radiology, Cumming School of Medicine, University of CalgaryDepartment of Radiology, Cumming School of Medicine, University of CalgaryDepartment of Radiology, Cumming School of Medicine, University of CalgaryDepartment of Radiology, Cumming School of Medicine, University of CalgaryDepartment of Radiology, Cumming School of Medicine, University of CalgaryMcCaig Institute for Bone and Joint Health, Cumming School of Medicine, University of CalgaryDepartment of Radiology, Cumming School of Medicine, University of CalgaryAbstract Background Medical imaging plays an important role in determining the progression of joint damage in rheumatoid arthritis (RA). High resolution peripheral quantitative computed tomography (HR-pQCT) is a sensitive tool capable of evaluating bone microarchitecture and erosions, and 3D rigid image registration can be used to visualize and quantify bone remodeling over time. However, patient motion during image acquisition can cause a “stack shift” artifact resulting in loss of information and reducing the number of erosions that can be analyzed using HR-pQCT. The purpose of this study was to use image registration to improve the number of useable HR-pQCT scans and to apply image-based bone remodeling assessment to the metacarpophalangeal (MCP) joints of RA patients. Methods Ten participants with RA completed HR-pQCT scans of the 2nd and 3rd MCP joints at enrolment to the study and at a 6-month follow-up interval. At 6-months, an additional repeat scan was acquired to evaluate reliability. HR-pQCT images were acquired in three individual 1 cm acquisitions (stacks) with a 25% overlap. We completed analysis first using standard evaluation methods, and second with multi-stack registration. We assessed whether additional erosions could be evaluated after multi-stack registration. Bone remodeling analysis was completed using registration and transformation of baseline and follow-up images. We calculated the bone formation and resorption volume fractions with 6-month follow-up, and same-day repositioning as a negative control. Results 13/57 (23%) of erosions could not be analyzed from raw images due to a stack shift artifact. All erosions could be volumetrically assessed after multi-stack registration. We observed that there was a median bone formation fraction of 2.1% and resorption fraction of 3.8% in RA patients over the course of 6 months. In contrast to the same-day rescan negative control, we observed median bone formation and resorption fractions of 0%. Conclusions Multi-stack image registration is a useful tool to improve the number of useable scans when analyzing erosions using HR-pQCT. Further, image registration can be used to longitudinally assess bone remodeling. These methods could be implemented in future studies to provide important pathophysiological information on the progression of bone damage.http://link.springer.com/article/10.1186/s12880-020-00437-8HR-pQCTImage registrationRheumatoid arthritisBone remodeling
collection DOAJ
language English
format Article
sources DOAJ
author Scott C. Brunet
Michael T. Kuczynski
Jennifer L. Bhatla
Sophie Lemay
Yves Pauchard
Peter Salat
Cheryl Barnabe
Sarah L. Manske
spellingShingle Scott C. Brunet
Michael T. Kuczynski
Jennifer L. Bhatla
Sophie Lemay
Yves Pauchard
Peter Salat
Cheryl Barnabe
Sarah L. Manske
The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scans
BMC Medical Imaging
HR-pQCT
Image registration
Rheumatoid arthritis
Bone remodeling
author_facet Scott C. Brunet
Michael T. Kuczynski
Jennifer L. Bhatla
Sophie Lemay
Yves Pauchard
Peter Salat
Cheryl Barnabe
Sarah L. Manske
author_sort Scott C. Brunet
title The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scans
title_short The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scans
title_full The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scans
title_fullStr The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scans
title_full_unstemmed The utility of multi-stack alignment and 3D longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation HR-pQCT scans
title_sort utility of multi-stack alignment and 3d longitudinal image registration to assess bone remodeling in rheumatoid arthritis patients from second generation hr-pqct scans
publisher BMC
series BMC Medical Imaging
issn 1471-2342
publishDate 2020-04-01
description Abstract Background Medical imaging plays an important role in determining the progression of joint damage in rheumatoid arthritis (RA). High resolution peripheral quantitative computed tomography (HR-pQCT) is a sensitive tool capable of evaluating bone microarchitecture and erosions, and 3D rigid image registration can be used to visualize and quantify bone remodeling over time. However, patient motion during image acquisition can cause a “stack shift” artifact resulting in loss of information and reducing the number of erosions that can be analyzed using HR-pQCT. The purpose of this study was to use image registration to improve the number of useable HR-pQCT scans and to apply image-based bone remodeling assessment to the metacarpophalangeal (MCP) joints of RA patients. Methods Ten participants with RA completed HR-pQCT scans of the 2nd and 3rd MCP joints at enrolment to the study and at a 6-month follow-up interval. At 6-months, an additional repeat scan was acquired to evaluate reliability. HR-pQCT images were acquired in three individual 1 cm acquisitions (stacks) with a 25% overlap. We completed analysis first using standard evaluation methods, and second with multi-stack registration. We assessed whether additional erosions could be evaluated after multi-stack registration. Bone remodeling analysis was completed using registration and transformation of baseline and follow-up images. We calculated the bone formation and resorption volume fractions with 6-month follow-up, and same-day repositioning as a negative control. Results 13/57 (23%) of erosions could not be analyzed from raw images due to a stack shift artifact. All erosions could be volumetrically assessed after multi-stack registration. We observed that there was a median bone formation fraction of 2.1% and resorption fraction of 3.8% in RA patients over the course of 6 months. In contrast to the same-day rescan negative control, we observed median bone formation and resorption fractions of 0%. Conclusions Multi-stack image registration is a useful tool to improve the number of useable scans when analyzing erosions using HR-pQCT. Further, image registration can be used to longitudinally assess bone remodeling. These methods could be implemented in future studies to provide important pathophysiological information on the progression of bone damage.
topic HR-pQCT
Image registration
Rheumatoid arthritis
Bone remodeling
url http://link.springer.com/article/10.1186/s12880-020-00437-8
work_keys_str_mv AT scottcbrunet theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT michaeltkuczynski theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT jenniferlbhatla theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT sophielemay theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT yvespauchard theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT petersalat theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT cherylbarnabe theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT sarahlmanske theutilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT scottcbrunet utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT michaeltkuczynski utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT jenniferlbhatla utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT sophielemay utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT yvespauchard utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT petersalat utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT cherylbarnabe utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
AT sarahlmanske utilityofmultistackalignmentand3dlongitudinalimageregistrationtoassessboneremodelinginrheumatoidarthritispatientsfromsecondgenerationhrpqctscans
_version_ 1724950653709582336