The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets
The method of regularized stokeslets is widely used in microscale biological fluid dynamics due to its ease of implementation, natural treatment of complex moving geometries, and removal of singular functions to integrate. The standard implementation of the method is subject to high computational co...
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doaj-591241723bfd4886bb9e7ac3c11e975b2021-06-10T08:57:27ZengThe Royal SocietyRoyal Society Open Science2054-57032021-05-018510.1098/rsos.210108The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokesletsM. T. Gallagher0D. J. Smith1Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, Birmingham, UKSchool of Mathematics, University of Birmingham, Birmingham, UKThe method of regularized stokeslets is widely used in microscale biological fluid dynamics due to its ease of implementation, natural treatment of complex moving geometries, and removal of singular functions to integrate. The standard implementation of the method is subject to high computational cost due to the coupling of the linear system size to the numerical resolution required to resolve the rapidly varying regularized stokeslet kernel. Here, we show how Richardson extrapolation with coarse values of the regularization parameter is ideally suited to reduce the quadrature error, hence dramatically reducing the storage and solution costs without loss of accuracy. Numerical experiments on the resistance and mobility problems in Stokes flow support the analysis, confirming several orders of magnitude improvement in accuracy and/or efficiency.https://royalsocietypublishing.org/doi/10.1098/rsos.210108Stokes flowstokesletsbiological fluid dynamics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
M. T. Gallagher D. J. Smith |
spellingShingle |
M. T. Gallagher D. J. Smith The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets Royal Society Open Science Stokes flow stokeslets biological fluid dynamics |
author_facet |
M. T. Gallagher D. J. Smith |
author_sort |
M. T. Gallagher |
title |
The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets |
title_short |
The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets |
title_full |
The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets |
title_fullStr |
The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets |
title_full_unstemmed |
The art of coarse Stokes: Richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets |
title_sort |
art of coarse stokes: richardson extrapolation improves the accuracy and efficiency of the method of regularized stokeslets |
publisher |
The Royal Society |
series |
Royal Society Open Science |
issn |
2054-5703 |
publishDate |
2021-05-01 |
description |
The method of regularized stokeslets is widely used in microscale biological fluid dynamics due to its ease of implementation, natural treatment of complex moving geometries, and removal of singular functions to integrate. The standard implementation of the method is subject to high computational cost due to the coupling of the linear system size to the numerical resolution required to resolve the rapidly varying regularized stokeslet kernel. Here, we show how Richardson extrapolation with coarse values of the regularization parameter is ideally suited to reduce the quadrature error, hence dramatically reducing the storage and solution costs without loss of accuracy. Numerical experiments on the resistance and mobility problems in Stokes flow support the analysis, confirming several orders of magnitude improvement in accuracy and/or efficiency. |
topic |
Stokes flow stokeslets biological fluid dynamics |
url |
https://royalsocietypublishing.org/doi/10.1098/rsos.210108 |
work_keys_str_mv |
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1721385255485571072 |